GPM10100154497: peptide AAA display

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GPM10100154497 | peptides |  HPLC |  pI vs. RT |  delta | ions | aaa |
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Residue Pre N-terminal C-terminal Post All Protein Unique Delta Residue
A 0.8 10.0 0.4 7.1 8.3 8.4 9.1 +8 A
C 0.2 1.0 0.1 0.7 0.8 1.8 0.8 -54 C
D 0.4 5.2 0.3 5.0 6.0 4.7 5.7 +23 D
E 0.1 6.6 0.4 7.4 8.0 6.4 8.2 +29 E
F 1.3 4.7 0.4 2.8 3.7 3.7 3.8 +1 F
G 0.4 7.8 0.3 8.2 7.9 8.4 8.2 -3 G
H 0.3 2.7 1.1 2.8 2.3 2.2 2.3 +2 H
I 0.0 5.9 0.3 6.1 5.3 4.8 5.3 +12 I
K 44.2 5.6 51.6 9.0 5.8 6.5 5.5 -15 K
L 0.4 10.1 0.1 9.9 10.0 9.4 10.1 +7 L
M 3.2 2.4 0.0 2.7 2.0 2.7 1.8 -32 M
N 1.2 4.3 0.8 3.7 4.5 3.5 3.3 -5 N
P 0.3 1.3 0.2 0.6 5.2 4.9 5.4 +10 P
Q 0.4 2.7 0.2 2.4 3.8 4.1 4.0 -3 Q
R 41.2 1.2 42.2 5.0 3.3 5.5 3.6 -35 R
S 1.9 8.6 0.4 5.4 6.6 7.2 7.1 -1 S
T 0.4 7.1 0.0 4.6 5.2 5.3 5.2 -2 T
V 0.4 9.1 0.8 8.1 7.2 6.8 7.0 +2 V
W 0.5 0.9 0.0 1.7 1.1 1.1 0.8 -25 W
Y 1.4 2.7 0.2 2.3 2.9 2.8 2.8 +2 Y
Notes:
  1. All numbers quoted as percentages;
  2. Residue: the amino acid residue, in single letter code;
  3. Pre: AAA of the residue in the protein sequence immediately prior to the N-terminus of each unique peptide;
  4. N-terminal: AAA of the N-terminal residue of each unique peptide;
  5. C-terminal: AAA of the C-terminal residue of each unique peptide;
  6. Post: AAA of the residue in the protein sequence immediately following the C-terminus of each unique peptide;
  7. All: AAA of all peptides identified (including multiple identifications of the same peptide sequence);
  8. Protein: AAA of all proteins identified;
  9. Unique: AAA of the unique peptides identified; and
  10. Delta: difference between the unique peptide AAA and the protein AAA
    • red if more than 1 standard deviation enrichment; or
    • green if more than 1 standard deviation depletion.
Contributor: Steven A. Carr
project comment Tissue source: adipose tissue mitochondria. Tranche  Pagliarini, DJ, Calvo, SE, Chang, B, Sheth, SA, Vafai, SB, Ong, SE, Walford, GA, Sugiana, C, Boneh, A, Chen, WK, Hill, DE, Vidal, M, Evans, JG, Thorburn, DR, Carr, SA and Mootha, VK, Cell, 2008, Data acquired using Thermo Fisher Scientific LTQ-Orbitraps.
GO subcellular GO:0005739 
project LC-MS/MS of mitochondrial proteins from 14 mouse tissues
store trace yes
email scarr@broad.edu
BRENDA tissue BTO:0000441 
institution Broad Institute

paaa.pl, v. 2010.09.02