GPM #:
Keyword:
   1 match for GPM10100155608, Display: model | gel | peptide | GO | BTO | path | snaps | aaa | mh | wiki
 BRENDA cell culture: none
BRENDA tissue: BTO:0000131 
CELL cell type: none
GO subcellular: none
institution: Cedars Sinai UCLA
name: Mallick, et al.
project: HUPO PPP2
project comment: Tranche  HUPO PPP2 submission from Cedars-Sinai (ProteomExchange). First batch of data. Human plasma.

      Best models for GPM10100155608 Show all , or display as
# log(e) accession coverage
1. -738 ALB
2. -508.3 sp|TRFE_HUMAN|
3. -206.8 A2M
4. -195.8 FGB
5. -190.6 HP
6. -172.3 IGHG1
7. -161 ENSP00000383643
8. -158.9 FGA
9. -151.2 FGG
10. -125.5 IGHA1
11. -116 IGHG2
12. -107.5 IGKC
13. -99.5 IGHM
14. -94.8 ENSP00000374987
15. -91.3 ENSP00000374856
16. -80.3 SERPINA1
17. -79 C3
18. -64.3 HPX
19. -64 IGHM
20. -60.7 APOA2

      Show all

Notes:
  1. Each of the diagrams indicates the patterns of peptides observed for proteins in a particular set of protein observations, identified by its GPM accession number. These patterns of experimentally determined peptides are commonly referred to as "protein sequence coverage" displays.
  2. The diagram elements are as follows:
    • black line: indicates the full length of the protein (all sequences are the same length in this display)
    • red bars: indicate observed peptides (the darker the red, the more confident the observations); and
    • green bars: indicate regions of the protein that may be difficult to observe, using standard proteomics techniques;
    • [X/Y]: the rank of a particular observation, with respect to all of the data in GPMDB.
      e.g., [3/10] means that this would be the 3rd best observation of this protein, out of 10 total observations.
  3. Clicking on the links to the left of the diagrams take you to a full display of the peptides and protein sequence information for that protein.
If you do not see a red dot in the square brackets [], you will need Adobe's SVG plugin to view this site properly.








dblist_gpmnum.pl, v. 2010.06.17