Ontology Collection, GO:0006350y transcription  excel   txt 
 
# accession total log(e) description
1. YOL004W 234 -795.7 transcription regulatory protein, SIN3, regulation of transcription from Pol II promoter, histone deacetylase activity, histone deacetylase complex
2. YGL207W 674 -664.3 general chromatin factor, SPT16, chromatin remodeling, Pol II transcription elongation factor activity, nuclear chromatin
3. YFL039C 1812 -517.5 actin, ACT1, cell wall organization and biogenesis, structural constituent of cytoskeleton, actin cortical patch (sensu Fungi)
4. YPR010C 773 -425 DNA-directed RNA polymerase I, 135 KD subunit, RPA135, transcription from Pol I promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase I complex
5. YBR103W 71 -388.2 Sir4p interacting protein, SIF2, chromatin silencing at telomere, NAD-dependent histone deacetylase activity, nucleus
6. YPR104C 64 -387.7 transcriptional activator of the forkhead/hnf3 family, FHL1, rRNA processing, transcription factor activity, nucleus
7. YLR442C 64 -361.5 silencing regulatory and DNA-repair protein, SIR3, chromatin silencing, histone binding, nucleolus
8. YOR341W 878 -349.3 DNA-directed RNA polymerase I, 190 KD alpha subunit, RPA190, transcription from Pol I promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase I complex
9. YNL139C 145 -346.9 regulatory protein, RLR1, mRNA-nucleus export, nucleic acid binding, THO complex
10. YBR121C 1097 -346.3 glycine--tRNA ligase, GRS1, glycyl-tRNA aminoacylation, glycine-tRNA ligase activity, cytoplasm
11. YMR075W 57 -345.3 weak similarity to human Mi-2 protein, RCO1, biological_process unknown, molecular_function unknown, nucleus
12. YDR138W 82 -335.2 hyperrecombination protein related to Top1p, HPR1, mRNA-nucleus export, nucleic acid binding, THO complex
13. YER069W 782 -313.9 acetylglutamate kinase and acetylglutamyl-phosphate reductase, ARG5, 2592, arginine biosynthesis, N-acetyl-gamma-glutamyl-phosphate reductase activity, mitochondrial matrix
14. YGR200C 240 -310.5 29 kDa subunit of elongator and elongating RNA polymerase II holoenzyme, ELP2, regulation of transcription from Pol II promoter, Pol II transcription elongation factor activity, transcription elongation factor complex
15. YIL128W 92 -308 involved in NER repair and RNA polymerase II transcription, MET18, transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleoplasm
16. YER171W 47 -302.3 DNA helicase/ATPase, RAD3, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIIH complex
17. YPL139C 72 -291.9 negative regulator of meiosis, UME1, regulation of meiosis, transcription corepressor activity, nucleus
18. YGR116W 526 -289.4 transcription elongation protein, SPT6, regulation of transcription, DNA-dependent, Pol II transcription elongation factor activity, nucleus
19. YDL140C 693 -286.3 DNA-directed RNA polymerase II, 215 KD subunit, RPO21, transcription from Pol II promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase II, core complex
20. YKL185W 64 -286.1 negative regulator of HO transcription, ASH1, pseudohyphal growth, specific transcriptional repressor activity, nucleus
21. YAL021C 215 -285.5 transcriptional regulator, CCR4, regulation of transcription from Pol II promoter, 3'-5'-exoribonuclease activity, cytoplasm
22. YOR151C 577 -263.7 DNA-directed RNA polymerase II, 140 kDa chain, RPB2, transcription from Pol II promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase II, core complex
23. YJR119C 21 -248 similarity to human retinoblastoma binding protein 2, biological_process unknown, molecular_function unknown, cytoplasm
24. YCR084C 493 -240 general transcription repressor, TUP1, negative regulation of transcription, general transcriptional repressor activity, nucleus
25. YOL145C 272 -236.7 required for G1 cyclin expression, CTR9, transcription from Pol II promoter, Pol II transcription elongation factor activity, nucleus
26. YNL330C 123 -235.2 histone deacetylase B, RPD3, chromatin silencing at telomere, histone deacetylase activity, histone deacetylase complex
27. YBR279W 146 -231.8 DNA-directed RNA polymerase II regulator, PAF1, RNA elongation from Pol II promoter, Pol II transcription elongation factor activity, nucleus
28. YML010W 516 -226.5 transcription elongation protein, SPT5, regulation of transcription, DNA-dependent, Pol II transcription elongation factor activity, nucleus
29. YDR190C 633 -226 RUVB-like protein, RVB1, regulation of transcription from Pol II promoter, ATPase activity, nucleus
30. YLR006C 40 -224.7 two-component signal transducer, SSK1, osmosensory signaling pathway via two-component system, enzyme activator activity, cytoplasm
31. YDR028C 186 -220.7 regulatory subunit for protein phosphatase Glc7p, REG1, negative regulation of transcription from Pol II promoter, protein phosphatase type 1 activity, cytoplasm
32. YOR230W 891 -215.8 transcriptional modulator, WTM1, regulation of meiosis, transcription corepressor activity, nucleus
33. YLR384C 462 -212.1 confers sensitivity to killer toxin, IKI3, regulation of transcription from Pol II promoter, Pol II transcription elongation factor activity, transcription elongation factor complex
34. YPL235W 556 -208.8 RUVB-like protein, RVB2, regulation of transcription from Pol II promoter, ATPase activity, nucleus
35. YBR112C 320 -207.5 general repressor of transcription, CYC8, negative regulation of transcription, transcription coactivator activity, nucleus
36. YPR023C 52 -206.6 similarity to human hypothetical protein, EAF3, regulation of transcription from Pol II promoter, histone acetyltransferase activity, histone acetyltransferase complex
37. YEL056W 85 -204.8 subunit of the major yeast histone acetyltransferase, HAT2, chromatin silencing at telomere, H3/H4 histone acetyltransferase activity, cytoplasm
38. YIL046W 64 -200.4 involved in regulation of sulfur assimilation genes and cell cycle progression, MET30, ubiquitin-dependent protein catabolism, protein binding, nuclear ubiquitin ligase complex
39. YAL013W 39 -198.6 regulator of phospholipid metabolism, DEP1, regulation of transcription from Pol II promoter, molecular_function unknown, cellular_component unknown
40. YPR110C 565 -197.6 DNA-directed RNA polymerase I, III 40 KD subunit, RPC40, transcription from Pol I promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase III complex
41. YOR209C 673 -194.9 nicotinate phosphoribosyltransferase, NPT1, chromatin silencing at telomere, nicotinate phosphoribosyltransferase activity, nucleus
42. YMR106C 73 -186.8 component of DNA end-joining repair pathway, YKU80, chromatin assembly or disassembly, RNA binding, nuclear chromatin
43. YOR229W 62 -186.6 transcriptional modulator, WTM2, regulation of meiosis, transcription corepressor activity, nucleus
44. YLR335W 462 -185.3 nuclear pore protein, NUP2, mRNA-nucleus export, structural molecule activity, nuclear pore
45. YER125W 379 -184.2 hect domain E3 ubiquitin-protein ligase, RSP5, protein monoubiquitination, ubiquitin-protein ligase activity, ubiquitin ligase complex
46. YCR093W 434 -184.1 nuclear protein, CDC39, regulation of transcription from Pol II promoter, 3'-5'-exoribonuclease activity, cytoplasm
47. YLR039C 64 -180.8 involved in transcription of ribosomal proteins and ribosomal RNA, RIC1, intracellular protein transport, guanyl-nucleotide exchange factor activity, nucleus
48. YER133W 611 -177 ser/thr phosphoprotein phosphatase 1, catalytic chain, GLC7, 35S primary transcript processing, protein phosphatase type 1 activity, nucleolus
49. YPL190C 166 -175.2 polyadenylated RNA-binding protein, NAB3, regulation of transcription from Pol II promoter, poly(A) binding, nucleus
50. YNL251C 174 -169.4 involved in regulation of nuclear pre-mRNA abundance, NRD1, transcription termination from Pol II promoter, poly(A)-independent, RNA binding, nucleus
51. YFR037C 320 -168.4 subunit of the RSC complex, RSC8, chromatin remodeling, molecular_function unknown, nucleus
52. YOL006C 165 -168.1 DNA topoisomerase I, TOP1, regulation of transcription from Pol II promoter, DNA topoisomerase type I activity, nucleus
53. YEL055C 286 -168.1 DNA polymerase V, POL5, rRNA transcription, NOT DNA-directed DNA polymerase activity, nucleolus
54. YNR031C 53 -166.7 MAP kinase kinase kinase of the high osmolarity signal transduction pathway, SSK2, protein amino acid phosphorylation, MAP kinase kinase kinase activity, cytosol
55. YPR133C 437 -166.3 similarity to C.elegans hypothetical protein, IWS1, RNA elongation from Pol II promoter, Pol II transcription elongation factor activity, transcription elongation factor complex
56. YDR457W 281 -157.5 E3 ubiqitin ligase required for G2/M transition, TOM1, protein monoubiquitination, ubiquitin-protein ligase activity, nucleus
57. YJL128C 94 -154.8 tyrosine protein kinase of the MAP kinase kinase family, PBS2, protein amino acid phosphorylation, MAP kinase kinase activity, cytoplasm
58. YML069W 324 -153.4 protein that binds to DNA polymerase I (PolI), POB3, chromatin remodeling, chromatin binding, nucleus
59. YER120W 655 -150.8 required for inositol metabolism, SCS2, chromatin silencing at telomere, protein binding, endoplasmic reticulum
60. YGL037C 688 -150 similarity to PIR:B70386 pyrazinamidase/nicotinamidase - Aquifex aeolicus, PNC1, chromatin silencing at telomere, nicotinamidase activity, cytoplasm
61. YIL084C 28 -149 transcriptional regulator, SDS3, chromatin silencing, protein binding, histone deacetylase complex
62. YGL244W 163 -146.8 regulates DNA binding properties of TBP, RTF1, transcription from Pol II promoter, Pol II transcription elongation factor activity, transcription elongation factor complex
63. YDL042C 17 -143.5 silencing regulatory protein and DNA-repair protein, SIR2, chromatin silencing at telomere, histone deacetylase activity, nucleolus
64. YDR496C 305 -142.9 similarity to hypothetical human and C.elegans proteins, PUF6, regulation of transcription, mating-type specific, specific transcriptional repressor activity, nucleus
65. YHR084W 90 -137.9 transcriptional activator, STE12, pseudohyphal growth, transcription factor activity, nucleus
66. YMR072W 280 -137.8 high mobility group protein, ABF2, mitochondrial genome maintenance, DNA binding, mitochondrial chromosome
67. YDL076C 19 -136 weak similarity to hypothetical protein S. pombe, RXT3, chromatin silencing, histone deacetylase activity, nucleus
68. YGL115W 216 -135.5 nuclear regulatory protein, SNF4, regulation of transcription from Pol II promoter, protein kinase activator activity, cytoplasm
69. YLR182W 93 -135.3 transcription factor, SWI6, meiosis, protein binding, cytoplasm
70. YOR061W 336 -134.7 casein kinase II alpha^ chain, CKA2, protein amino acid phosphorylation, protein kinase CK2 activity, protein kinase CK2 complex
71. YIL126W 230 -134.2 subunit of the RSC complex, STH1, chromatin remodeling, ATPase activity, nucleus
72. YBR175W 20 -123.5 similarity to S.pombe beta-transducin, SWD3, chromatin silencing at telomere, chromatin binding, nuclear chromatin
73. YPL037C 689 -122.5 GAL4 DNA-binding enhancer protein, EGD1, nascent polypeptide association, unfolded protein binding, cytosolic ribosome (sensu Eukarya)
74. YDR216W 72 -122.2 zinc-finger transcription factor, ADR1, transcription, transcription factor activity, nucleus
75. YFL028C 125 -119.2 ATP-binding cassette transporter family member, CAF16, regulation of transcription, DNA-dependent, ATPase activity, coupled to transmembrane movement of substances, cytoplasm
76. YAL032C 22 -115.9 pre-mRNA splicing factor, PRP45, positive regulation of transcription from Pol II promoter, transcriptional activator activity, nucleus
77. YKR036C 52 -110.2 CCR4 associated factor, CAF4, regulation of transcription, DNA-dependent, protein binding, CCR4-NOT complex
78. YIL021W 198 -106.9 DNA-directed RNA-polymerase II, 45 kDa, RPB3, transcription from Pol II promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase II, core complex
79. YPL001W 80 -104.9 histone acetyltransferase subunit, HAT1, chromatin silencing at telomere, H3/H4 histone acetyltransferase activity, cytoplasm
80. YGL112C 181 -102.4 TFIID and SAGA subunit, TAF6, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, SAGA complex
81. YIL035C 122 -101.2 casein kinase II, catalytic alpha chain, CKA1, protein amino acid phosphorylation, protein kinase CK2 activity, protein kinase CK2 complex
82. YNL113W 426 -100.5 DNA-directed RNA polymerase I, III 16 KD subunit, RPC19, transcription from Pol I promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase III complex
83. YOR116C 201 -96.7 DNA-directed RNA polymerase III, 160 KD subunit, RPO31, transcription from Pol III promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase III complex
84. YML065W 41 -95.8 origin recognition complex, 104 KD subunit, ORC1, DNA replication initiation, ATPase activity, nuclear origin of replication recognition complex
85. YKL058W 112 -95.6 TFIIA subunit (transcription initiation factor), 13.5 kD, TOA2, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIIA complex
86. YGL019W 157 -93.9 casein kinase II, beta subunit, CKB1, protein amino acid phosphorylation, protein kinase CK2 activity, protein kinase CK2 complex
87. YMR219W 116 -92 Establishes Silent Chromatin, ESC1, chromatin silencing at telomere, molecular_function unknown, nucleus
88. YER075C 15 -91.5 protein tyrosine phosphatase, PTP3, signal transduction during conjugation with cellular fusion, protein tyrosine phosphatase activity, cytoplasm
89. YER089C 317 -89.4 protein serine/threonine phosphatase of the PP2C family, PTC2, G1/S transition of mitotic cell cycle, protein phosphatase type 2C activity, cytoplasm
90. YNL103W 88 -86.3 transcriptional activator of sulfur metabolism, MET4, positive regulation of transcription from Pol II promoter, transcription coactivator activity, nucleus
91. YHR099W 203 -84.1 component of the Ada-Spt transcriptional regulatory complex, TRA1, regulation of transcription from Pol II promoter, histone acetyltransferase activity, histone acetyltransferase complex
92. YPL181W 44 -83.9 Cyc8-Tup1 Interacting protein, CTI6, positive regulation of transcription, transcription factor binding, nucleus
93. YLR288C 17 -80.6 G2-specific checkpoint protein, MEC3, chromatin silencing at telomere, DNA binding, nucleus
94. YNL288W 76 -80.5 strong similarity to C.elegans hypothetical protein, CAF40, regulation of transcription from Pol II promoter, molecular_function unknown, CCR4-NOT complex
95. YIL038C 180 -80.5 general negative regulator of transcription, subunit 3, NOT3, regulation of transcription from Pol II promoter, 3'-5'-exoribonuclease activity, cytoplasm
96. YPL129W 267 -80 TFIIF subunit (transcription initiation factor), 30 kD, TAF14, chromatin remodeling, general RNA polymerase II transcription factor activity, nucleosome remodeling complex
97. YDR174W 484 -79.7 Non-histone protein, HMO1, plasmid maintenance, RNA polymerase I transcription factor activity, cytoplasm
98. YNL097C 23 -79 involved in transcriptional regulation of PHO5, PHO23, chromatin modification, histone deacetylase activity, nucleus
99. YJL076W 328 -78.8 required for rDNA silencing and nucleolar integrity, NET1, chromatin silencing at ribosomal DNA, ribosomal DNA (rDNA) binding, nucleolus
100. YNL248C 264 -77.5 DNA-directed RNA polymerase A (I) chain, 46 kDa, RPA49, transcription from Pol I promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase I complex
101. YOR039W 130 -76.9 casein kinase II beta^ chain, CKB2, protein amino acid phosphorylation, protein kinase CK2 activity, protein kinase CK2 complex
102. YOR224C 252 -76.3 DNA-directed RNA polymerase I, II, III 16 KD subunit, RPB8, transcription from Pol II promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase III complex
103. YHR041C 52 -75.2 DNA-directed RNA polymerase II holoenzyme and Kornberg^s mediator (SRB) subcomplex subunit, SRB2, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
104. YKR002W 162 -74.1 poly(A) polymerase, PAP1, mRNA polyadenylylation, polynucleotide adenylyltransferase activity, nucleoplasm
105. YLR399C 150 -73.6 sporulation protein, BDF1, chromatin remodeling, transcription regulator activity, nucleus
106. YLR071C 74 -73.1 DNA-directed RNA polymerase II holoenzyme subunit, RGR1, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
107. YCR094W 21 -72.8 cell division cycle mutant, CDC50, regulation of transcription, transcription regulator activity, late endosome
108. YLR025W 364 -72.1 class E Vps protein, SNF7, late endosome to vacuole transport, molecular_function unknown, cytoplasm
109. YOR340C 209 -71.3 DNA-directed RNA polymerase I, 36 KD subunit, RPA43, transcription from Pol I promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase I complex
110. YAL043C 116 -71.3 pre-tRNA processing protein / PF I subunit, PTA1, mRNA polyadenylylation, cleavage and polyadenylylation specificity factor activity, mRNA cleavage and polyadenylation specificity factor complex
111. YMR263W 36 -71.2 subunit of the histone deacetylase B complex, SAP30, chromatin silencing at telomere, histone deacetylase activity, histone deacetylase complex
112. YNL216W 251 -69.2 DNA-binding protein with repressor and activator activity, RAP1, chromatin silencing at telomere, DNA binding, nucleus
113. YJR063W 182 -68.5 DNA-directed RNA polymerase I, 13.7 KD subunit, RPA12, transcription from Pol I promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase I complex
114. YLR113W 276 -67.8 ser/thr protein kinase of MAP kinase (MAPK) family, HOG1, protein amino acid phosphorylation, MAP kinase activity, cytoplasm
115. YDL108W 9 -67 cyclin-dependent ser/thr protein kinase, KIN28, protein amino acid phosphorylation, general RNA polymerase II transcription factor activity, transcription factor TFIIH complex
116. YKR008W 118 -66.5 member of RSC complex, which remodels the structure of chromatin, RSC4, chromatin remodeling, molecular_function unknown, nucleosome remodeling complex
117. YLR055C 77 -66.2 transcriptional adaptor or co-activator, SPT8, histone acetylation, transcription cofactor activity, nucleus
118. YDR303C 141 -66 similarity to transcriptional regulator proteins, RSC3, regulation of transcription, DNA-dependent, DNA binding, nucleus
119. YJL140W 121 -65.8 DNA-directed RNA polymerase II, 32 kDa subunit, RPB4, transcription from Pol II promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase II, core complex
120. YDR416W 21 -65.4 synthetic lethal with CDC40, SYF1, nuclear mRNA splicing, via spliceosome, molecular_function unknown, spliceosome complex
121. YPR093C 8 -65.4 weak similarity to zinc-finger proteins, biological_process unknown, molecular_function unknown, cellular_component unknown
122. YDR227W 67 -64.9 silencing regulatory and DNA-repair protein, SIR4, chromatin silencing, histone binding, nuclear telomere cap complex
123. YNL236W 97 -64.8 global regulator protein, SIN4, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
124. YJL176C 160 -64.2 transcription regulatory protein, SWI3, chromatin remodeling, general RNA polymerase II transcription factor activity, nucleosome remodeling complex
125. YER164W 134 -64.2 transcriptional regulator, CHD1, chromatin remodeling, ATPase activity, transcription elongation factor complex
126. YGL201C 128 -63.8 involved in replication, MCM6, DNA replication initiation, chromatin binding, cytoplasm
127. YOL005C 135 -63.6 DNA-directed RNA polymerase II subunit, 13.6 kD, RPB11, transcription from Pol II promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase II, core complex
128. YGR186W 141 -62.5 TFIIF subunit (transcription initiation factor), 105 kD, TFG1, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIIF complex
129. YOR304W 109 -62.5 strong similarity to Drosophila ISW1 and human Snf2p homolog, ISW2, chromatin remodeling, ATPase activity, nucleus
130. YDL235C 133 -62 phosphorelay intermediate between Sln1p and Ssk1p, YPD1, response to osmotic stress, transferase activity, transferring phosphorus-containing groups, cytoplasm
131. YMR284W 20 -60.1 high-affinity DNA-binding protein, YKU70, chromatin assembly or disassembly, RNA binding, nuclear membrane
132. YBL056W 157 -59.6 ser/thr protein phosphatase PP2C, PTC3, protein amino acid dephosphorylation, protein phosphatase type 2C activity, cytoplasm
133. YGL151W 137 -59.1 negative transcription regulator from artifical reporters, NUT1, regulation of transcription from Pol II promoter, molecular_function unknown, nucleus
134. YGR047C 55 -58.8 TFIIIC (transcription initiation factor) subunit, 131 kD, TFC4, transcription initiation from Pol III promoter, RNA polymerase III transcription factor activity, transcription factor TFIIIC complex
135. YPR070W 36 -58.8 component of RNA polymerase II holoenzyme and mediator subcomplex, MED1, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
136. YML062C 75 -58.2 mitochondrial fusion target protein, MFT1, mRNA-nucleus export, nucleic acid binding, THO complex
137. YGL043W 228 -57.8 TFIIS (transcription elongation factor), DST1, meiotic recombination, positive transcription elongation factor activity, nucleoplasm
138. YPR072W 142 -56.5 component of the NOT protein complex, NOT5, regulation of transcription from Pol II promoter, 3'-5'-exoribonuclease activity, cytoplasm
139. YPL086C 126 -55.9 subunit of elongator/RNAPII holoenzyme with histone acetylase activity, ELP3, regulation of transcription from Pol II promoter, Pol II transcription elongation factor activity, transcription elongation factor complex
140. YLR274W 123 -54.6 cell division control protein, CDC46, DNA replication initiation, chromatin binding, cytoplasm
141. YOR123C 185 -54.6 extremely hydrophilic protein, LEO1, transcription from Pol II promoter, Pol II transcription elongation factor activity, transcription elongation factor complex
142. YBR154C 373 -54.5 DNA-directed RNA polymerase I, II, III 25 KD subunit, RPB5, transcription from Pol II promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase III complex
143. YER063W 286 -54 weak similarity to human heterogeneous ribonuclear particle protein U, THO1, transcription, DNA-dependent, molecular_function unknown, nucleus
144. YML076C 41 -53.4 weak similarity to transcription factor, WAR1, response to acid, transcription factor activity, nucleus
145. YER111C 55 -52.5 transcription factor, SWI4, G1/S transition of mitotic cell cycle, transcription factor activity, nucleus
146. YKL018W 59 -51.7 similarity to C.elegans hypothetical protein, SWD2, histone methylation, histone lysine N-methyltransferase activity (H3-K4 specific), mRNA cleavage and polyadenylation specificity factor complex
147. YKL112W 84 -51 ARS-binding factor, ABF1, DNA replication, DNA binding, nuclear chromatin
148. YOL012C 358 -50.3 evolutionarily conserved member of the histone H2A F/Z family of histone variants, HTZ1, regulation of transcription from Pol II promoter, chromatin binding, nuclear chromatin
149. YDR310C 112 -50.2 suppressor of SIR mutations, SUM1, chromatin silencing at telomere, transcriptional repressor activity, nucleus
150. YFL013C 42 -48.8 INO80 chromatin remodeling complex subunit 1, IES1, chromatin remodeling, molecular_function unknown, nucleus
151. YPL016W 98 -48.7 component of SWI/SNF global transcription activator complex, SWI1, chromatin remodeling, general RNA polymerase II transcription factor activity, nucleosome remodeling complex
152. YPL127C 279 -48.5 histone H1 protein, HHO1, regulation of transcription, DNA-dependent, DNA binding, nucleus
153. YGL070C 79 -48.2 DNA-directed RNA polymerase II, 14.2 KD subunit, RPB9, transcription from Pol II promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase II, core complex
154. YCR052W 91 -48.2 subunit of the RSC complex, RSC6, chromatin remodeling, molecular_function unknown, nucleosome remodeling complex
155. YBR060C 48 -47.8 origin recognition complex, 72 kDa subunit, ORC2, DNA replication initiation, DNA replication origin binding, nuclear origin of replication recognition complex
156. YPR019W 94 -46.9 member of the Cdc46p/Mcm2p/Mcm3p family, CDC54, DNA replication initiation, chromatin binding, cytoplasm
157. YLR418C 160 -46.7 DNA-directed RNA polymerase II accessory protein, CDC73, RNA elongation from Pol II promoter, Pol II transcription elongation factor activity, transcription elongation factor complex
158. YLR403W 32 -46.1 zinc finger protein, SFP1, regulation of cell size, transcription factor activity, nucleus
159. YBR049C 131 -46.1 transcription factor, REB1, regulation of transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
160. YGR229C 179 -45.8 beta-1, 3-glucan synthesis protein, SMI1, cell wall organization and biogenesis, molecular_function unknown, nucleus
161. YPR187W 106 -45.6 DNA-directed RNA polymerase I, II, III 18 KD subunit, RPO26, transcription from Pol II promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase III complex
162. YPR052C 199 -45.4 nonhistone chromosomal protein related to mammalian HMG1, NHP6A, regulation of transcription from Pol II promoter, chromatin binding, nuclear chromatin
163. YML127W 125 -45.2 weak similarity to Los1p, RSC9, regulation of transcription from Pol II promoter, chromatin binding, chromatin remodeling complex
164. YLR321C 83 -45.1 subunit of the RSC complex, SFH1, chromatin remodeling, protein binding, nucleosome remodeling complex
165. YMR070W 21 -45.1 high-copy suppressor of MOT1-SPT3 synthetic lethality, MOT3, transcription, DNA binding, nucleus
166. YLR005W 53 -45.1 TFIIH subunit (transcription initiation factor), factor B, SSL1, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIIH complex
167. YIL130W 67 -44.6 similarity to Put3p and to hypothetical protein YJL206c, biological_process unknown, molecular_function unknown, nucleus
168. YPR190C 149 -43.9 DNA-directed RNA polymerase III, 82 KD subunit, RPC82, transcription from Pol III promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase III complex
169. YOR207C 251 -43.6 DNA-directed RNA polymerase III, 130 KD subunit, RET1, transcription from Pol III promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase III complex
170. YBR089C-A 127 -43.5 nonhistone chromosomal protein, NHP6B, regulation of transcription from Pol II promoter, chromatin binding, nuclear chromatin
171. YMR033W 160 -43.1 Actin-related protein, ARP9, chromatin remodeling, general RNA polymerase II transcription factor activity, nucleus
172. YJR017C 162 -42.8 processing/termination factor 1, ESS1, negative regulation of transcription from Pol II promoter, peptidyl-prolyl cis-trans isomerase activity, nucleus
173. YER088C 101 -42.6 involved in derepression of telomeric silencing, DOT6, regulation of transcription from Pol II promoter, molecular_function unknown, cytoplasm
174. YER161C 35 -42.3 multifunctional HMG-like chromatin protein, SPT2, negative regulation of transcription from Pol II promoter, DNA binding, nucleus
175. YDL074C 131 -41.8 weak similarity to spindle pole body protein NUF1, BRE1, chromatin silencing at telomere, ubiquitin-protein ligase activity, nucleus
176. YLR226W 23 -41.7 divergent CDK-cyclin complex, BUR2, transcription, cyclin-dependent protein kinase regulator activity, nucleus
177. YNL059C 131 -41.4 Actin-related protein, ARP5, protein-vacuolar targeting, molecular_function unknown, nucleus
178. YLR033W 81 -41.3 hypothetical protein, RSC58, chromatin remodeling, molecular_function unknown, RSC complex
179. YGL014W 124 -41.1 similarity to Drosophila pumilio protein and Mpt5p protein, PUF4, mRNA catabolism, deadenylylation-dependent, mRNA binding, cytoplasm
180. YHR079C 38 -40.8 protein kinase, IRE1, protein amino acid phosphorylation, protein serine/threonine kinase activity, endoplasmic reticulum membrane
181. YDR301W 35 -40.5 pre-mRNA 3^-end processing factor CF II, CFT1, mRNA polyadenylylation, cleavage and polyadenylylation specificity factor activity, mRNA cleavage and polyadenylation specificity factor complex
182. YAR003W 21 -40.3 subunit of the COMPASS complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres, SWD1, chromatin silencing at telomere, transcriptional activator activity, nuclear chromatin
183. YDR404C 99 -40.2 DNA-directed RNA polymerase II, 19 KD subunit, RPB7, transcription from Pol II promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase II, core complex
184. YHR143W-A 217 -39.4 DNA-directed RNA polymerases I, II, III 7.7 KD subunit, RPC10, transcription from Pol II promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase III complex
185. YBR202W 82 -39.2 cell division control protein, CDC47, DNA replication initiation, chromatin binding, cytoplasm
186. YBL023C 92 -39.2 member of the Mcm2p, Mcm3p, Cdc46p family, MCM2, DNA replication initiation, chromatin binding, cytoplasm
187. YFL033C 61 -39.1 protein kinase involved in expression of meiotic genes, RIM15, protein amino acid phosphorylation, protein kinase activity, cytoplasm
188. YDL150W 105 -38.9 DNA-directed RNA polymerase III, 47 KD subunit, RPC53, transcription from Pol III promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase III complex
189. YDL165W 46 -38.8 transcription factor, CDC36, regulation of transcription from Pol II promoter, 3'-5'-exoribonuclease activity, cytoplasm
190. YPL082C 151 -38.5 transcriptional accessory protein, MOT1, regulation of transcription from Pol II promoter, ATPase activity, nuclear chromosome
191. YDR009W 57 -37.6 galactokinase, GAL3, regulation of transcription, DNA-dependent, protein binding, cytoplasm
192. YNL262W 150 -37.4 DNA-directed DNA polymerase epsilon, catalytic subunit A, POL2, chromatin silencing at telomere, epsilon DNA polymerase activity, replication fork
193. YML007W 105 -37.3 transcriptional activator involved in oxidative stress response, YAP1, response to oxidative stress, transcription factor activity, cytoplasm
194. YNL151C 71 -37.3 DNA-directed RNA polymerase III, 31 KD subunit, RPC31, transcription from Pol III promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase III complex
195. YGR097W 92 -37.2 involved in Skn7p-dependent transcription, ASK10, response to oxidative stress, transcription regulator activity, cytoplasm
196. YGL130W 69 -37.1 mRNA guanylyltransferase (mRNA capping enzyme, alpha subunit), CEG1, mRNA capping, mRNA guanylyltransferase activity, nucleus
197. YOR210W 81 -36.6 DNA-directed polymerase I, II, III 8.3 subunit, RPB10, transcription from Pol II promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase III complex
198. YLR357W 80 -36.5 member of RSC complex, which remodels the structure of chromatin, RSC2, chromatin remodeling, molecular_function unknown, nucleosome remodeling complex
199. YGR005C 80 -36.1 TFIIF subunit (transcription initiation factor), 54 kD, TFG2, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIIF complex
200. YEL032W 169 -35.9 replication initiation protein, MCM3, DNA replication initiation, chromatin binding, cytoplasm
201. YCL061C 51 -35.9 similarity to URK1, MRC1, chromatin silencing at telomere, molecular_function unknown, nucleus
202. YNL021W 58 -35.4 histone deacetylase A, HDA1, regulation of transcription, DNA-dependent, histone deacetylase activity, histone deacetylase complex
203. YDR121W 84 -35.1 DNA polymerase II (epsilon) 4th subunit, DPB4, chromatin silencing at telomere, epsilon DNA polymerase activity, chromatin accessibility complex
204. YDL005C 48 -34.5 transcriptional regulation mediator, MED2, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
205. YMR176W 53 -34.5 involved in cell wall biogenesis and architecture, ECM5, cell wall organization and biogenesis, molecular_function unknown, nucleus
206. YGR246C 37 -34.4 TFIIIB subunit, 70 kD, BRF1, transcription initiation from Pol III promoter, RNA polymerase III transcription factor activity, transcription factor TFIIIB complex
207. YMR039C 140 -34.3 transcriptional coactivator, SUB1, positive regulation of transcription from Pol II promoter, transcription coactivator activity, nucleus
208. YBR198C 145 -34.3 TFIID and SAGA subunit, TAF5, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, SAGA complex
209. YBR215W 76 -34.2 cell cycle regulatory protein, HPC2, G1/S-specific transcription in mitotic cell cycle, transcription regulator activity, nucleus
210. YCR042C 40 -34.1 component of TFIID complex, TAF2, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIID complex
211. YDR045C 60 -34 RNA polymerase III subunit C11, required for RNA cleavage activity and transcription termination, RPC11, transcription from Pol III promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase III complex
212. YDR460W 44 -34 TFIIH subunit (transcription/repair factor), TFB3, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIIH complex
213. YHR167W 55 -33.9 subunit of the THO complex, which appears to functionally connect transcription elongation with mitotic recombination, THP2, mRNA-nucleus export, nucleic acid binding, THO complex
214. YLR131C 29 -33.8 metallothionein expression activator, ACE2, G1-specific transcription in mitotic cell cycle, transcriptional activator activity, nucleus
215. YMR231W 66 -33.7 vacuolar biogenesis protein, PEP5, late endosome to vacuole transport, molecular_function unknown, vacuolar membrane (sensu Fungi)
216. YML051W 8 -33.4 negative regulator for expression of galactose-induced genes, GAL80, regulation of transcription, DNA-dependent, transcription corepressor activity, cytoplasm
217. YBR081C 112 -33.1 involved in alteration of transcription start site selection, SPT7, protein complex assembly, structural molecule activity, SAGA complex
218. YGR156W 69 -32.4 weak similarity to PIR:A40220 cleavage stimulation factor 64K chain - human, PTI1, mRNA polyadenylylation, pre-mRNA cleavage factor activity, nucleus
219. YDR181C 26 -32.1 involved in silencing at telomeres, SAS4, chromatin silencing at telomere, H3/H4 histone acetyltransferase activity, nuclear chromatin
220. YIL131C 13 -32 forkhead protein, involved in transcriptional silencing, cell morphology and cell cycle, FKH1, pseudohyphal growth, transcription factor activity, nucleus
221. YDR159W 49 -32 leucine permease transcriptional regulator, SAC3, mRNA-nucleus export, protein binding, nuclear pore
222. YHR119W 95 -31.6 involved in chromatin-mediated gene regulation, SET1, chromatin silencing at telomere, histone lysine N-methyltransferase activity (H3-K4 specific), nucleus
223. YLL004W 28 -31.6 origin recognition complex, 62 kDa subunit, ORC3, DNA replication initiation, DNA replication origin binding, nuclear origin of replication recognition complex
224. YLR285W 64 -31.3 weak similarity to A.thaliana hypothetical protein, NNT1, chromatin silencing at ribosomal DNA, nicotinamide N-methyltransferase activity, cytoplasm
225. YGR063C 46 -31.3 transcription elongation protein, SPT4, regulation of transcription, DNA-dependent, Pol II transcription elongation factor activity, nucleus
226. YNR003C 50 -30.9 DNA-directed RNA polymerase III, 34 KD subunit, RPC34, transcription from Pol III promoter, DNA-directed RNA polymerase activity, cytoplasm
227. YDR145W 106 -30.3 TFIID and SAGA subunit, TAF12, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, SAGA complex
228. YNR052C 62 -30.2 required for glucose derepression, POP2, regulation of transcription from Pol II promoter, 3'-5'-exoribonuclease activity, cytoplasm
229. YOR194C 16 -29.9 TFIIA subunit (transcription initiation factor), 32 kD, TOA1, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIIA complex
230. YGR274C 86 -29.9 TFIID subunit (TBP-associated factor), 145 kD, TAF1, protein amino acid phosphorylation, general RNA polymerase II transcription factor activity, transcription factor TFIID complex
231. YGL013C 59 -29.4 transcription factor, PDR1, regulation of transcription from Pol II promoter, DNA binding, nucleus
232. YAL001C 54 -29.1 TFIIIC (transcription initiation factor) subunit, 138 kD, TFC3, transcription initiation from Pol III promoter, RNA polymerase III transcription factor activity, transcription factor TFIIIC complex
233. YGL150C 67 -28 similarity to Snf2p and human SNF2alpha, INO80, chromatin remodeling, ATPase activity, chromatin remodeling complex
234. YPL128C 53 -28 telomere TTAGGG repeat-binding factor 1, TBF1, loss of chromatin silencing, DNA binding, nucleus
235. YOR290C 105 -27.8 component of SWI/SNF global transcription activator complex, SNF2, chromatin remodeling, general RNA polymerase II transcription factor activity, nucleosome remodeling complex
236. YOR110W 50 -27.8 TFIIIC (transcription initiation factor) subunit, 55 kDa, TFC7, transcription initiation from Pol III promoter, RNA polymerase III transcription factor activity, transcription factor TFIIIC complex
237. YDL006W 13 -27.7 protein serine/threonine phosphatase 2c, PTC1, response to osmotic stress, protein phosphatase type 2C activity, cytoplasm
238. YPR179C 44 -27.6 Subunit of a tetrameric trichostatin A-sensitive class II histone deacetylase complex, HDA3, regulation of transcription, DNA-dependent, histone deacetylase activity, nucleus
239. YKR099W 37 -27.4 transcription factor, BAS1, transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
240. YDR156W 71 -27.2 DNA-directed RNA polymerase I, A14 subunit, RPA14, transcription from Pol I promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase I complex
241. YOL051W 82 -27.1 DNA-directed RNA polymerase II holoenzyme and Kornberg^s mediator (SRB) subcomplex subunit, GAL11, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
242. YBR195C 13 -26.9 chromatin assembly complex, subunit p50, MSI1, DNA repair, molecular_function unknown, chromatin assembly complex
243. YDR295C 82 -26.8 Subunit of a tetrameric trichostatin A-sensitive class II histone deacetylase complex , HDA2, regulation of transcription, DNA-dependent, histone deacetylase activity, nucleus
244. YPR034W 101 -26.8 component of SWI-SNF global transcription activator complex and RSC chromatin remodeling complex, ARP7, chromatin remodeling, general RNA polymerase II transcription factor activity, nucleus
245. YMR016C 48 -26.8 regulatory protein in the PKA signal transduction pathway, SOK2, pseudohyphal growth, transcription factor activity, nucleus
246. YHR056C 43 -26.7 strong similarity to YHR054c, RSC30, regulation of transcription, DNA-dependent, DNA binding, RSC complex
247. YMR172W 18 -26.4 similarity to MSN1 protein, HOT1, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nuclear chromosome
248. YNL068C 58 -26.3 homology to D.melanogaster forkhead protein, FKH2, pseudohyphal growth, transcription factor activity, nucleus
249. YDR527W 55 -26.2 weak similarity to Plasmodium yoelii rhoptry protein, RBA50, transcription from Pol II promoter, DNA-directed RNA polymerase activity, cytoplasm
250. YOR140W 30 -26.1 transcription factor, SFL1, negative regulation of transcription from Pol II promoter, specific transcriptional repressor activity, nuclear chromosome
251. YPR086W 99 -26 TFIIB subunit (transcription initiation factor), factor E, SUA7, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, nucleoplasm
252. YJL081C 48 -26 actin-related protein, ARP4, regulation of transcription from Pol II promoter, chromatin binding, nucleus
253. YJR140C 39 -25.9 involved in cell cycle regulation of histone transcription, HIR3, G1/S-specific transcription in mitotic cell cycle, transcription corepressor activity, nucleus
254. YPL254W 27 -25.6 transcriptional coactivator, HFI1, transcription from Pol II promoter, transcription cofactor activity, SAGA complex
255. YKL032C 39 -25.6 intrastrand crosslink recognition protein and transcription factor, IXR1, DNA repair, DNA binding, nuclear chromosome
256. YKR029C 45 -25.2 similarity to YJL105w and Lentinula MFBA protein, SET3, histone deacetylation, NAD-dependent histone deacetylase activity, histone deacetylase complex
257. YNL257C 31 -25.1 Snf1p protein kinase interacting protein, SIP3, transcription initiation from Pol II promoter, transcription cofactor activity, nucleus
258. YML109W 28 -24.9 multicopy suppressor of sin4, ZDS2, establishment of cell polarity (sensu Saccharomyces), molecular_function unknown, nucleus
259. YHL020C 27 -24.9 negative regulator of phospholipid biosynthesis pathway, OPI1, positive regulation of transcription from Pol II promoter, transcription corepressor activity, nucleus
260. YMR005W 34 -24.9 required for protein synthesis, TAF4, transcription from Pol II promoter, RNA polymerase II transcription factor activity, transcription factor TFIID complex
261. YHR187W 38 -24.9 confers sensitivity to killer toxin, IKI1, regulation of transcription from Pol II promoter, Pol II transcription elongation factor activity, transcription elongation factor complex
262. YLL022C 26 -24.8 Hat1 Interacting Factor 1, HIF1, chromatin silencing at telomere, molecular_function unknown, nucleus
263. YCR073C 27 -24.5 MAP kinase kinase kinase, SSK22, protein amino acid phosphorylation, MAP kinase kinase kinase activity, cellular_component unknown
264. YNR023W 49 -24.2 component of SWI/SNF global transcription activator complex, SNF12, chromatin remodeling, general RNA polymerase II transcription factor activity, nucleosome remodeling complex
265. YOR113W 41 -24 asparagine-rich zinc finger protein, AZF1, regulation of transcription, DNA-dependent, DNA binding, nucleus
266. YKR062W 66 -24 TFIIE subunit (transcription initiation factor), 43 KD, TFA2, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIIE complex
267. YGL162W 6 -23.9 hypoxic protein involved in sterol uptake, SUT1, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
268. YMR179W 17 -23.7 required for normal transcription at a number of loci, SPT21, regulation of transcription from Pol II promoter, molecular_function unknown, nucleus
269. YLR256W 51 -23.7 transcription factor, HAP1, aerobic respiration, specific RNA polymerase II transcription factor activity, nucleus
270. YER068W 94 -23.7 transcriptional repressor, MOT2, regulation of transcription from Pol II promoter, 3'-5'-exoribonuclease activity, cytoplasm
271. YGL181W 61 -23.5 transcription factor of the Gcs1p/Glo3p/Sps18p family, GTS1, sporulation (sensu Fungi), transcriptional activator activity, cytoplasm
272. YDR195W 60 -23.3 RNA 3^-end formation protein, REF2, mRNA processing, cleavage and polyadenylylation specificity factor activity, nucleus
273. YOR174W 39 -22.9 transcription regulation mediator, MED4, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
274. YKL005C 28 -22.8 Suppressor of ESS1 Prolyl Isomerase interact With RNA Pol II to inhibit Transcription Elongation, BYE1, negative regulation of transcription from Pol II promoter, transcriptional elongation regulator activity, nucleus
275. YDR397C 60 -22.7 functional homolog of human NC2beta/Dr1, NCB2, negative regulation of transcription from Pol II promoter, transcription corepressor activity, nucleus
276. YDR443C 55 -22.5 DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit, SSN2, negative regulation of transcription from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor complex
277. YGR104C 14 -22.4 DNA-directed RNA polymerase II holoenzyme and Kornberg^s mediator (SRB) subcomplex subunit, SRB5, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
278. YDR081C 59 -22.3 pyruvate decarboxylase regulatory protein, PDC2, transcription from Pol II promoter, transcription regulator activity, nucleus
279. YJL168C 82 -22.1 enhancer of zeste-like, SET2, regulation of transcription, DNA-dependent, histone-lysine N-methyltransferase activity, nucleus
280. YGL073W 54 -22.1 heat shock transcription factor, HSF1, regulation of transcription from Pol II promoter, transcription factor activity, nucleus
281. YOR281C 123 -21.7 phosducin homologue, likely to be involved in regulation of pheromone response, PLP2, positive regulation of transcription from Pol II promoter by pheromones, GTPase inhibitor activity, cytoplasm
282. YPL116W 50 -21.6 similarity to Hos1p, Hos2p, Hos3p, Rpd3p and human histone deacetylase HD1, HOS3, histone deacetylation, histone deacetylase activity, cytoplasm
283. YIR033W 24 -21.6 may be involved in the remodeling chromatin structure, MGA2, positive regulation of transcription from Pol II promoter, transcriptional activator activity, endoplasmic reticulum membrane
284. YDR217C 46 -21.5 DNA repair checkpoint protein, RAD9, DNA repair, protein binding, nucleus
285. YMR043W 43 -21.4 transcription factor of the MADS box family, MCM1, regulation of transcription from Pol II promoter, DNA binding, nucleus
286. YOR141C 94 -21.4 Actin-related protein, ARP8, biological_process unknown, molecular_function unknown, nucleus
287. YDR228C 56 -21.4 component of pre-mRNA 3^-end processing factor CF I, PCF11, mRNA polyadenylylation, protein binding, mRNA cleavage factor complex
288. YIL036W 77 -21.3 ATF/CREB activator, CST6, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
289. YOL148C 29 -21.3 member of the TBP class of SPT proteins that alter transcription site selection, SPT20, histone acetylation, transcription cofactor activity, SAGA complex
290. YBL103C 34 -21.2 bHLH/zip transcription factor that regulates CIT2 gene expression, RTG3, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, cytoplasm
291. YDR311W 62 -21.2 TFIIH subunit (transcription initiation factor), 75 kD, TFB1, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIIH complex
292. YPR025C 48 -21.2 TFIIH subunit (transcription initiation factor), cyclin C component, CCL1, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIIH complex
293. YER148W 47 -20.9 the TATA-binding protein TBP, SPT15, transcription initiation from Pol II promoter, DNA binding, nucleus
294. YPL038W 17 -20.7 transcriptional regulator of sulfur amino acid metabolism, MET31, regulation of transcription, DNA binding, cytoplasm
295. YMR312W 29 -20.6 subunit of RNA polymerase II elongator complex, ELP6, regulation of transcription from Pol II promoter, Pol II transcription elongation factor activity, transcription elongation factor complex
296. YPL070W 47 -20.6 weak similarity to Vps9p, MUK1, regulation of transcription, molecular_function unknown, cytoplasm
297. YDL056W 49 -20.4 transcription factor, subunit of the MBF factor, MBP1, regulation of cell cycle, DNA binding, nucleus
298. YKL028W 40 -20.4 TFIIE subunit (transcription initiation factor), 66 kD, TFA1, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIIE complex
299. YDR207C 48 -20.3 negative transcriptional regulator, UME6, negative regulation of transcription, mitotic, DNA binding, nucleus
300. YDR167W 102 -19.9 TFIID and SAGA subunit, TAF10, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, SAGA complex
301. YKL062W 36 -19.9 transcriptional activator, MSN4, response to stress, DNA binding, cytoplasm
302. YPL015C 40 -19.8 similarity to Hst1p and Sir2p, HST2, chromatin silencing at telomere, NAD-dependent histone deacetylase activity, cytoplasm
303. YML113W 7 -19.8 datin, oligo(dA)/oligo(dT)-binding protein, DAT1, negative regulation of transcription from Pol II promoter, AT DNA binding, nucleus
304. YLR176C 17 -19.7 repressor of DNA damage-inducible genes, RFX1, negative regulation of transcription from Pol II promoter, specific transcriptional repressor activity, cytoplasm
305. YGR252W 21 -19.7 histone acetyltransferase, GCN5, histone acetylation, histone acetyltransferase activity, SAGA complex
306. YER045C 5 -19.4 ATF/CREB activator, ACA1, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
307. YMR273C 41 -19.2 involved in negative regulation of cell polarity, ZDS1, establishment of cell polarity (sensu Saccharomyces), protein binding, cytoplasm
308. YDR469W 39 -19.2 weak similarity to D. melanogaster hypothetical protein, SDC1, chromatin silencing at telomere, chromatin binding, nuclear chromatin
309. YKL020C 43 -19 dosage-dependent suppressor of Ty-induced promotor mutations, SPT23, positive regulation of transcription from Pol II promoter, transcriptional activator activity, endoplasmic reticulum membrane
310. YGL133W 52 -18.9 subunit of Isw2 chromatin remodelling complex, ITC1, chromatin remodeling, molecular_function unknown, nucleus
311. YBR083W 10 -18.8 Ty transcription activator, TEC1, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
312. YIL147C 46 -18.8 two-component signal transducer, SLN1, protein amino acid phosphorylation, osmosensor activity, plasma membrane
313. YFL031W 2 -18.7 transcription factor, HAC1, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
314. YHR206W 47 -18.6 transcription factor with similarity to Hsf1p, SKN7, response to osmotic stress, transcription factor activity, nucleus
315. YMR227C 23 -18.6 TFIID subunit (TBP-associated factor), 67 kD, TAF7, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, nucleus
316. YDL166C 49 -18.5 involved in the oxidative stress response , FAP7, processing of 20S pre-rRNA, molecular_function unknown, nucleus
317. YNL023C 52 -18.4 similarity to D.melanogaster shuttle craft protein, FAP1, biological_process unknown, transcription factor activity, cellular_component unknown
318. YKL144C 14 -18.4 DNA-direcred RNA polymerase III, 25 KD subunit, RPC25, transcription from Pol III promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase III complex
319. YGL131C 22 -18.2 weak similarity to S.pombe hypothetical protein C3H1.12C, SNT2, biological_process unknown, molecular_function unknown, cytoplasm
320. YPL221W 57 -18.2 strong similarity to YGL139w and YAL053w, BOP1, biological_process unknown, molecular_function unknown, bud neck
321. YEL062W 18 -18.1 nitrogen permease regulator, NPR2, urea transport, channel regulator activity, cellular_component unknown
322. YER040W 27 -18.1 transcription factor for positive nitrogen regulation, GLN3, positive regulation of transcription from Pol II promoter, transcription factor activity, nucleus
323. YKL038W 23 -18 regulator of glucose-induced genes, RGT1, glucose metabolism, DNA binding, nucleus
324. YJL056C 23 -18 metalloregulatory protein involved in zinc-responsive transcriptional regulation, ZAP1, regulation of transcription from Pol II promoter, DNA binding, nucleus
325. YJL127C 9 -18 transcription regulatory protein, SPT10, chromatin remodeling, histone acetyltransferase activity, nucleus
326. YNL039W 45 -18 TFIIIB subunit, 90 kD, BDP1, transcription initiation from Pol III promoter, RNA polymerase III transcription factor activity, transcription factor TFIIIB complex
327. YDR485C 12 -18 similarity to trichohyalin, VPS72, protein-vacuolar targeting, molecular_function unknown, cytoplasm
328. YBR123C 54 -18 TFIIIC (transcription initiation factor) subunit, 95 kD, TFC1, transcription initiation from Pol III promoter, RNA polymerase III transcription factor activity, transcription factor TFIIIC complex
329. YDR096W 53 -17.9 DNA damage-responsive repressor of PHR1, GIS1, phospholipid metabolism, transcription factor activity, nucleus
330. YDL106C 23 -17.9 homeodomain protein, PHO2, transcription, transcription factor activity, nucleus
331. YML114C 14 -17.8 TBP Associated Factor 65 KDa, TAF8, transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
332. YLR417W 16 -17.5 defective in vacuolar protein sorting, VPS36, protein-vacuolar targeting, regulator of G-protein signaling activity, ESCRT II complex
333. YNL261W 10 -17.5 origin recognition complex, 50 kDa subunit, ORC5, DNA replication initiation, ATPase activity, nuclear origin of replication recognition complex
334. YHR006W 12 -17.4 involved in pre-tRNA splicing, STP2, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
335. YHL027W 13 -17.3 meiotic regulatory protein, RIM101, meiosis, specific transcriptional repressor activity, nucleus
336. YML099C 15 -17.3 transcription factor involved in arginine metabolism, ARG81, arginine metabolism, transcription cofactor activity, nucleus
337. YBL052C 24 -17.1 silencing protein, SAS3, chromatin silencing at telomere, histone acetyltransferase activity, nuclear nucleosome
338. YHR122W 40 -17.1 similarity to hypothetical C. elegans protein F45G2.a, transcription, molecular_function unknown, cytoplasm
339. YDL002C 45 -16.9 Non-histone protein, NHP10, chromatin remodeling, molecular_function unknown, nucleus
340. YPR161C 50 -16.6 ser/thr protein kinase, SGV1, protein amino acid phosphorylation, cyclin-dependent protein kinase activity, nucleus
341. YAL051W 28 -16.6 peroxisome proliferating transcription factor, OAF1, peroxisome organization and biogenesis, DNA binding, nucleus
342. YOL054W 24 -16.6 weak similarity to transcription factors, PSH1, RNA elongation from Pol II promoter, molecular_function unknown, nucleus
343. YDR110W 21 -16.5 DNA replication fork blocking protein, FOB1, DNA recombination, ribosomal DNA (rDNA) binding, nucleolus
344. YBL066C 37 -16.5 putative transcription factor, SEF1, biological_process unknown, molecular_function unknown, cellular_component unknown
345. YNL278W 60 -16.4 similarity to YLR187w, CAF120, regulation of transcription from Pol II promoter, molecular_function unknown, CCR4-NOT complex
346. YDR005C 25 -16.4 required for sorting of Mod5p, MAF1, negative regulation of transcription from Pol III promoter, molecular_function unknown, nucleus
347. YBR278W 27 -16.2 DNA-directed DNA polymerase epsilon, subunit C, DPB3, chromatin silencing at telomere, epsilon DNA polymerase activity, replication fork
348. YBR275C 50 -16.1 RAP1-interacting factor 1, RIF1, chromatin silencing at telomere, molecular_function unknown, nuclear telomere cap complex
349. YNL076W 19 -16 pleiotropic regulatory factor, MKS1, regulation of nitrogen utilization, transcriptional repressor activity, intracellular
350. YLR015W 37 -16 weak similarity to S.pombe hypothetical protein SPBC13G1, BRE2, chromatin silencing at telomere, chromatin binding, nuclear chromatin
351. YFL024C 36 -15.9 weak similarity to YMR164c and Gal11p, EPL1, regulation of transcription from Pol II promoter, histone acetyltransferase activity, histone acetyltransferase complex
352. YER169W 23 -15.9 similarity to human retinoblastoma binding protein 2, RPH1, DNA repair, specific transcriptional repressor activity, nucleus
353. YNL107W 23 -15.9 similarity to human AF-9 protein, YAF9, chromatin remodeling, molecular_function unknown, cytoplasm
354. YPL089C 23 -15.4 transcription factor of the MADS box family, RLM1, cell wall organization and biogenesis, DNA binding, nucleus
355. YNL136W 17 -15.4 similarity to neurofilament triplet M protein, EAF7, biological_process unknown, molecular_function unknown, nucleus
356. YOR363C 26 -15.4 peroxisome proliferating transcription factor, PIP2, peroxisome organization and biogenesis, DNA binding, nucleus
357. YPR008W 36 -15.3 similarity to transcription factor, HAA1, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
358. YJL006C 11 -15.1 carboxy-terminal domain (CTD) kinase, beta subunit, CTK2, protein amino acid phosphorylation, cyclin-dependent protein kinase regulator activity, nucleus
359. YCR065W 14 -14.9 transcription factor, HCM1, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
360. YNR010W 17 -14.9 subunit of RNA polymerase II mediator complex, CSE2, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
361. YER022W 81 -14.7 DNA-directed RNA polymerase II holoenzyme and Kornberg^s mediator (SRB) subcomplex subunit, SRB4, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
362. YJL011C 28 -14.7 DNA-directed RNA polymerase III, 17, 7 KD subunit, RPC17, transcription initiation from Pol III promoter, DNA-directed RNA polymerase activity, DNA-directed RNA polymerase III complex
363. YPR168W 10 -14.6 negative transcription regulator from artifical reporters, NUT2, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
364. YPL007C 17 -14.5 RNA Polymerase III transcription initiation factor TFIIIC (tau), 60 kDa subunit, TFC8, transcription initiation from Pol III promoter, RNA polymerase III transcription factor activity, transcription factor TFIIIC complex
365. YLR052W 39 -14.4 INO80 chromatin remodeling complex subunit 3, IES3, chromatin remodeling, molecular_function unknown, nucleus
366. YML102W 26 -14.4 chromatin assembly complex, subunit p60, CAC2, DNA repair, molecular_function unknown, chromatin assembly complex
367. YDR176W 43 -14.3 general transcriptional adaptor or co-activator, NGG1, histone acetylation, transcription cofactor activity, SAGA complex
368. YGL035C 36 -14.1 transcriptional repressor, MIG1, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, cytoplasm
369. YPL011C 23 -14.1 component of the TBP-associated protein complex, TAF3, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIID complex
370. YDR363W 17 -14 involved in silencing, ESC2, chromatin silencing at silent mating-type cassette (sensu Fungi), molecular_function unknown, nucleus
371. YNL222W 21 -13.9 suppressor of cs mutant of sua7, SSU72, 35S primary transcript processing, protein tyrosine phosphatase activity, nucleus
372. YER028C 12 -13.9 similarity to Mig1p, MIG3, negative regulation of transcription from Pol II promoter, DNA binding, nucleus
373. YMR112C 18 -13.7 mediator complex subunit, MED11, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
374. YPL101W 20 -13.7 RNA polymerase II Elongator protein subunit, ELP4, regulation of transcription from Pol II promoter, Pol II transcription elongation factor activity, cytoplasm
375. YOR244W 24 -13.5 histone acetyltransferase, ESA1, regulation of transcription from Pol II promoter, histone acetyltransferase activity, histone acetyltransferase complex
376. YIR023W 48 -13.5 transcriptional activator for allantoin and GABA catabolic genes, DAL81, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
377. YGL025C 20 -13.4 mediator complex subunit, PGD1, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
378. YDL070W 26 -13.4 similarity to bromodomain protein Bdf1p, BDF2, biological_process unknown, molecular_function unknown, nucleus
379. YNL199C 13 -13.3 glycolytic genes transcriptional activator, GCR2, positive regulation of transcription from Pol II promoter, transcriptional activator activity, nucleus
380. YMR236W 23 -13.1 TFIID and SAGA subunit, TAF9, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, SAGA complex
381. YMR037C 31 -12.8 stress responsive regulatory protein, MSN2, response to stress, DNA binding, nucleus
382. YDR073W 3 -12.7 component of SWI/SNF transcription activator complex, SNF11, chromatin remodeling, general RNA polymerase II transcription factor activity, nucleosome remodeling complex
383. YDR464W 57 -12.6 negative regulator of PRP3 and PRP4 gene expression, SPP41, negative regulation of transcription from Pol II promoter, molecular_function unknown, nucleus
384. YPR162C 33 -12.6 origin recognition complex, 56 KD subunit, ORC4, DNA replication initiation, DNA replication origin binding, nuclear origin of replication recognition complex
385. YFR034C 15 -12.6 transcription factor, PHO4, phosphate metabolism, transcription factor activity, cytoplasm
386. YGL237C 9 -12.4 CCAAT-binding factor subunit, HAP2, transcription, transcriptional activator activity, nucleus
387. YOL135C 36 -12.4 member of RNA Polymerase II transcriptional regulation mediator complex, MED7, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
388. YMR277W 67 -12.3 TFIIF interacting component of CTD phosphatase, FCP1, transcription, phosphoprotein phosphatase activity, nucleus
389. YOL067C 50 -12.1 basic helix-loop-helix transcription factor that regulates CIT2 gene expression, RTG1, transcription initiation from Pol II promoter, transcription coactivator activity, cytoplasm
390. YKL139W 13 -11.9 carboxy-terminal domain (CTD) kinase, alpha subunit, CTK1, protein amino acid phosphorylation, protein kinase activity, nucleus
391. YDR146C 15 -11.9 transcription factor, SWI5, G1-specific transcription in mitotic cell cycle, transcriptional activator activity, cytoplasm
392. YLR228C 26 -11.9 strong similarity to YDR213w, weak similarity to Lys14p, ECM22, sterol biosynthesis, RNA polymerase II transcription factor activity, nucleus
393. YDR392W 37 -11.6 general transcriptional adaptor or co-activator, SPT3, sporulation (sensu Fungi), transcription cofactor activity, SAGA complex
394. YNL027W 22 -11.6 calcineurin responsive zinc-finger, CRZ1, regulation of transcription, DNA-dependent, transcription factor activity, cytoplasm
395. YIL143C 51 -11.5 DNA helicase, SSL2, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIIH complex
396. YOL089C 15 -11.5 transcriptional activator of ENA1, HAL9, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
397. YER159C 56 -11.4 functional homolog of human NC2alpha, BUR6, negative regulation of transcription from Pol II promoter, transcription corepressor activity, nucleus
398. YCR081W 37 -11.3 DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit, SRB8, negative regulation of transcription from Pol II promoter, RNA polymerase II transcription mediator activity, transcription factor complex
399. YKR019C 20 -11.2 Increased rDNA silencing, IRS4, chromatin silencing at ribosomal DNA, molecular_function unknown, mitochondrion
400. YJL125C 22 -11.2 translational repressor of GCN4, GCD14, tRNA methylation, tRNA methyltransferase activity, nucleus
401. YOR337W 19 -11.1 TY1 enhancer activator, TEA1, transcription, DNA binding, nucleus
402. YHR058C 44 -11.1 RNA polymerase II transcriptional regulation mediator, MED6, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
403. YFL021W 18 -11.1 transcription factor for nitrogen regulation, GAT1, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
404. YPL122C 39 -11.1 TFIIH subunit (transcription/repair factor), TFB2, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIIH complex
405. YLR098C 12 -11 transcription factor, CHA4, regulation of transcription, DNA-dependent, transcription factor activity, nucleus
406. YCL055W 8 -10.9 regulatory protein required for pheromone induction of karyogamy genes, KAR4, meiosis, transcription regulator activity, nucleus
407. YHR118C 10 -10.8 origin recognition complex, 50 KD subunit, ORC6, DNA replication initiation, DNA replication origin binding, nuclear origin of replication recognition complex
408. YFL052W 9 -10.2 strong similarity to Mal63p, YPR196w and Mal13p, biological_process unknown, DNA binding, cellular_component unknown
409. YBL008W 53 -10.1 histone transcription regulator, HIR1, regulation of transcription from Pol II promoter, transcription corepressor activity, nucleus
410. YLR278C 39 -9.8 weak similarity to regulatory proteins, biological_process unknown, molecular_function unknown, nucleus
411. YPL133C 8 -9.8 weak similarity to transcription factors, RDS2, response to xenobiotic stimulus, transcription factor activity, cytoplasm
412. YNL167C 41 -9.8 cre-binding bzip protein, SKO1, negative regulation of transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
413. YDR440W 20 -9.7 putative ATPase, DOT1, chromatin silencing at telomere, protein-lysine N-methyltransferase activity, nucleus
414. YML015C 24 -9.6 TFIID subunit (TBP-associated factor), 40KD, TAF11, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIID complex
415. YDR173C 32 -9.6 arginine metabolism transcription factor, ARG82, arginine metabolism, inositol or phosphatidylinositol kinase activity, nucleus
416. YKR101W 18 -9.5 silencing regulatory protein, SIR1, chromatin silencing at silent mating-type cassette (sensu Fungi), DNA binding, chromatin silencing complex
417. YHR178W 26 -9.5 transcription factor, SIN3 binding, STB5, response to xenobiotic stimulus, transcription factor activity, nucleus
418. YKL125W 40 -9.5 RNA polymerase I specific transcription factor, RRN3, transcription from Pol I promoter, RNA polymerase I transcription factor activity, RNA polymerase I transcription factor complex
419. YER064C 31 -9.4 similarity to hypothetical protein YIL056w, regulation of transcription, molecular_function unknown, nucleus
420. YPL248C 8 -9.3 transcription factor, GAL4, regulation of transcription, DNA-dependent, transcriptional activator activity, nucleus
421. YDR448W 9 -9.2 general transcriptional adaptor or co-activator, ADA2, histone acetylation, transcription coactivator activity, SAGA complex
422. YJL025W 7 -9.2 polymerase I specific transcription initiation factor, RRN7, transcription from Pol I promoter, RNA polymerase I transcription factor activity, RNA polymerase I transcription factor complex
423. YPL138C 27 -8.9 weak similarity to fruit fly polycomblike nuclear protein, SPP1, chromatin silencing at telomere, transcriptional activator activity, nuclear chromatin
424. YOR025W 24 -8.8 silencing protein, HST3, chromatin silencing at telomere, DNA binding, nucleus
425. YOR208W 36 -8.6 protein-tyrosine-phosphatase, PTP2, signal transduction during conjugation with cellular fusion, protein tyrosine phosphatase activity, nucleus
426. YBR193C 13 -8.5 transcriptional regulation mediator, MED8, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
427. YOR038C 55 -8.5 histone transcription regulator, HIR2, regulation of transcription from Pol II promoter, transcription corepressor activity, nucleus
428. YDR439W 11 -8.4 involved in rDNA silencing, LRS4, chromatin silencing at ribosomal DNA, molecular_function unknown, nucleus
429. YGL166W 22 -8.4 copper-dependent transcription factor, CUP2, transcription initiation from Pol II promoter, ligand-regulated transcription factor activity, nucleus
430. YGR134W 18 -8.4 hypothetical protein, CAF130, regulation of transcription from Pol II promoter, molecular_function unknown, CCR4-NOT complex
431. YOR279C 5 -8.2 hypothetical protein, RFM1, chromatin silencing, unfolded protein binding, nucleus
432. YPL042C 13 -8.1 cyclin-dependent CTD kinase, SSN3, protein amino acid phosphorylation, general RNA polymerase II transcription factor activity, transcription factor complex
433. YMR021C 13 -8.1 metal binding activator, MAC1, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
434. YKL089W 17 -8 inner kinetochore protein, MIF2, mitotic spindle assembly (sensu Fungi), centromeric DNA binding, nucleus
435. YMR228W 14 -8 RNA polymerase specific factor, mitochondrial, MTF1, transcription from mitochondrial promoter, transcription cofactor activity, mitochondrial matrix
436. YOL072W 39 -7.9 weak similarity to hypothetical protein C. elegans, THP1, bud site selection, protein binding, nuclear pore
437. YDR034C 19 -7.9 transcriptional activator of lysine pathway genes, LYS14, lysine biosynthesis, aminoadipic pathway, transcriptional activator activity, nucleus
438. YOR162C 33 -7.9 transcription factor, YRR1, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
439. YMR019W 209 -7.9 weak similarity to YIL130w, Put3p and other transcription factors, STB4, biological_process unknown, DNA binding, nucleus
440. YPR030W 30 -7.7 similarity to YBL101c, CSR2, cell wall organization and biogenesis, molecular_function unknown, nucleus
441. YDR191W 5 -7.6 member of the Sir2p family of putative NAD-dependent histone deacetylases, HST4, chromatin silencing at telomere, DNA binding, cytoplasm
442. YKL015W 33 -7.6 positive activator of the proline utilisation pathway, PUT3, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
443. YBR150C 39 -7.6 weak similarity to transcription factors, TBS1, biological_process unknown, molecular_function unknown, cytoplasm
444. YDR253C 8 -7.5 transcriptional regulator of sulfur amino acid metabolism, MET32, sulfur amino acid metabolism, DNA binding, nucleus
445. YJL206C 16 -7.2 similarity to YIL130p and Put3p, biological_process unknown, molecular_function unknown, cellular_component unknown
446. YBR289W 25 -7.2 component of SWI/SNF transcription activator complex, SNF5, chromatin remodeling, general RNA polymerase II transcription factor activity, nucleosome remodeling complex
447. YHR124W 13 -7.2 meiosis-specific protein, NDT80, meiosis, transcription factor activity, nuclear chromosome
448. YHL025W 10 -7.1 global transcription activator, SNF6, chromatin remodeling, general RNA polymerase II transcription factor activity, nucleosome remodeling complex
449. YGR056W 24 -7.1 member of RSC complex, which remodels the structure of chromatin, RSC1, chromatin remodeling, molecular_function unknown, nucleosome remodeling complex
450. YDR463W 7 -7 pre-tRNA splicing protein, transcription factor, STP1, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
451. YBR297W 6 -7 maltose fermentation regulatory protein, MAL33, regulation of transcription, DNA-dependent, transcription factor activity, nucleus
452. YGL178W 24 -6.9 multicopy suppressor of POP2, MPT5, cell wall organization and biogenesis, mRNA binding, cytoplasm
453. YPL075W 24 -6.9 transcriptional activator, GCR1, positive regulation of transcription from Pol II promoter, DNA binding, nucleus
454. YJR102C 4 -6.9 weak similarity to hypothetical protein D. melanogaster, VPS25, protein-vacuolar targeting, molecular_function unknown, ESCRT II complex
455. YDR213W 24 -6.8 regulatory protein involved in control of sterol uptake, UPC2, sterol biosynthesis, RNA polymerase II transcription factor activity, cytoplasm
456. YLR451W 10 -6.8 transcription factor, LEU3, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
457. YOR372C 8 -6.5 protein required for nuclear division, NDD1, G2/M-specific transcription in mitotic cell cycle, transcriptional activator activity, nucleus
458. YOL068C 13 -6.5 silencing protein, HST1, chromatin silencing, NAD-dependent histone deacetylase activity, nucleus
459. YJL065C 5 -6.4 Dpb3-Like Subunit of ISW2/yCHRAC complex, DLS1, chromatin silencing at telomere, molecular_function unknown, nucleus
460. YDR423C 10 -6.4 transcriptional activator, CAD1, positive regulation of transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
461. YPL202C 5 -6.3 similarity to cell size regulation protein Rcs1p, AFT2, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
462. YPL177C 1 -6.2 involved in copper homeostasis repression of protein import, CUP9, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
463. YBL014C 26 -6.2 RNA polymerase I specific transcription initiation factor, RRN6, transcription from Pol I promoter, RNA polymerase I transcription factor activity, RNA polymerase I transcription factor complex
464. YPR031W 15 -6.2 similarity to human zinc-finger protein BR140, NTO1, biological_process unknown, molecular_function unknown, cytoplasm
465. YPR065W 7 -6 heme-dependent transcriptional repressor of hypoxic genes, ROX1, negative regulation of transcription from Pol II promoter, specific transcriptional repressor activity, nuclear chromosome
466. YKR064W 24 -6 weak similarity to transcription factors, biological_process unknown, molecular_function unknown, cytoplasm
467. YGL209W 4 -6 C2H2 zinc-finger protein, MIG2, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
468. YMR280C 22 -5.8 transcription factor involved in gluconeogenesis, CAT8, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
469. YLR223C 18 -5.8 pre-rRNA processing machinery control protein, IFH1, rRNA processing, molecular_function unknown, nucleus
470. YDR520C 25 -5.7 weak similarity to transcription factors of the zinc finger class, biological_process unknown, molecular_function unknown, cytoplasm
471. YOR344C 3 -5.7 basic helix-loop-helix transcription factor, TYE7, transcription, transcription factor activity, nucleus
472. YFL036W 37 -5.7 DNA-directed RNA polymerase, mitochondrial, RPO41, mitochondrial genome maintenance, DNA-directed RNA polymerase activity, mitochondrial matrix
473. YPR196W 5 -5.4 strong similarity to regulatory protein Mal63p, biological_process unknown, molecular_function unknown, cellular_component unknown
474. YDR308C 4 -5.4 DNA-directed RNA polymerase II holoenzyme and kornberg^s mediator (SRB) subcomplex subunit, SRB7, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
475. YDR252W 5 -5.4 alternate beta subunit of the nascent polypeptide-associated complex, BTT1, nascent polypeptide association, unfolded protein binding, cytosolic ribosome (sensu Eukarya)
476. YBR253W 8 -5.3 DNA-directed RNA polymerase II suppressor protein, SRB6, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, mediator complex
477. YPR068C 9 -5.3 similarity to human histone deacetylase HD1, HOS1, regulation of transcription, DNA-dependent, histone deacetylase activity, histone deacetylase complex
478. YDR043C 8 -5.2 transcriptional repressor for glucose repression of STA1 gene expression, NRG1, regulation of transcription from Pol II promoter, DNA binding, nucleus
479. YPR056W 18 -5.1 component of RNA polymerase transcription initiation TFIIH factor, TFB4, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIIH complex
480. YGL194C 7 -5.1 putative histone deacetylase, HOS2, regulation of transcription, DNA-dependent, NAD-dependent histone deacetylase activity, histone deacetylase complex
481. YHR090C 11 -5.1 component of NuA4 histone acetyltransferase complex, YNG2, chromatin modification, enzyme activator activity, nucleus
482. YML112W 10 -5.1 carboxy-terminal domain (CTD) kinase, gamma subunit, CTK3, protein amino acid phosphorylation, cyclin-dependent protein kinase activity, nucleus
483. YHL009C 8 -5 transcription factor, of a fungal-specific family of bzip proteins, YAP3, regulation of transcription from Pol II promoter, transcription factor activity, nucleus
484. YDR123C 6 -4.9 basic helix-loop-helix (BHLH) transcription factor, INO2, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
485. YCL032W 11 -4.9 pheromone response pathway protein, STE50, signal transduction during conjugation with cellular fusion, protein kinase regulator activity, cytoplasm
486. YDR183W 2 -4.8 Phosducin homologue likely to be involved in regulation of pheromone response, PLP1, positive regulation of transcription from Pol II promoter by pheromones, GTPase inhibitor activity, cytoplasm
487. YPL026C 4 -4.7 suppressor kinase of snf3, SKS1, protein amino acid phosphorylation, protein serine/threonine kinase activity, cytoplasm
488. YJL110C 5 -4.7 transcriptional repressor, GZF3, negative regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
489. YML098W 2 -4.6 TFIID subunit (TBP-associated factor), 19 kD, TAF13, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, nucleus
490. YDR362C 6 -4.6 TFIIIC (transcription initiation factor) subunit, 91 kD, TFC6, transcription initiation from Pol III promoter, RNA polymerase III transcription factor activity, transcription factor TFIIIC complex
491. YBL093C 1 -4.4 transcription factor, ROX3, transcription from Pol II promoter, RNA polymerase II transcription mediator activity, nucleus
492. YPR186C 5 -4.4 TFIIIA (transcription initiation factor), PZF1, transcription initiation from Pol III promoter, RNA polymerase III transcription factor activity, transcription factor complex
493. YOL017W 16 -4.3 similarity to YFR013w, ESC8, chromatin silencing, molecular_function unknown, nucleus
494. YOR358W 2 -4.2 CCAAT-binding factor subunit, HAP5, transcription, transcriptional activator activity, CCAAT-binding factor complex
495. YOR064C 4 -4.2 component of histone acetyltransferase complex, has similarity to human retinoblastoma binding protein 2, YNG1, histone acetylation, molecular_function unknown, histone acetyltransferase complex
496. YBR239C 17 -4.1 weak similarity to transcription factor Put3p, biological_process unknown, molecular_function unknown, cytoplasm
497. YKL222C 15 -4 weak similarity to transcription factors, similarity to finger proteins YOR162c, YOR172w and YLR266c, biological_process unknown, molecular_function unknown, cellular_component unknown
498. YDR026C 41 -4 strong similarity to DNA-binding protein Reb1p, biological_process unknown, molecular_function unknown, nucleolus
499. YOR028C 2 -3.8 transcriptional activator, CIN5, regulation of transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
500. YGR044C 3 -3.4 zinc-finger transcription factor, RME1, meiosis, specific transcriptional repressor activity, nucleus
501. YER184C 16 -3.2 similarity to multidrug resistance proteins Pdr3p and Pdr1p, biological_process unknown, molecular_function unknown, cellular_component unknown
502. YDR421W 26 -3.2 positive transcription regulator of ARO9 and ARO10, ARO80, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
503. YGR288W 10 -3.2 maltose pathway regulatory protein, MAL13, regulation of transcription, DNA-dependent, transcription factor activity, nucleus
504. YDL197C 23 -3.2 anti-silencing protein, ASF2, chromatin silencing at silent mating-type cassette (sensu Fungi), molecular_function unknown, nucleus
505. YOR380W 12 -3.1 weak similarity to Pdr3p, RDR1, response to xenobiotic stimulus, transcription factor activity, nucleus
506. YML043C 4 -3 RNA polymerase I specific transcription initiation factor, RRN11, transcription from Pol I promoter, RNA polymerase I transcription factor activity, RNA polymerase I transcription factor complex
507. YJR147W 8 -3 High-copy MEP2 Suppressor, HMS2, pseudohyphal growth, molecular_function unknown, cytoplasm
508. YLR014C 21 -2.9 transcription factor regulating pyrimidine pathway, PPR1, regulation of transcription, DNA-dependent, transcription factor activity, nucleus
509. YPL047W 4 -2.8 weak similarity to A. thaliana genomic DNA, SGF11, biological_process unknown, molecular_function unknown, nucleus
510. YPR005C 4 -2.8 salt-induced protein, HAL1, positive regulation of transcription from Pol II promoter, molecular_function unknown, cytoplasm
511. YOR213C 14 -2.7 subunit of the RSC complex, SAS5, chromatin silencing at telomere, H3/H4 histone acetyltransferase activity, nuclear chromatin
512. YOR295W 7 -2.6 subunit of RNA polymerase I transcription factor, UAF30, transcription from Pol I promoter, RNA polymerase I transcription factor activity, RNA polymerase I upstream activating factor complex
513. YMR136W 11 -2.5 weak similarity to YIR013c and YLR013w, GAT2, transcription, transcription factor activity, nucleus
514. YLL054C 13 -2.5 similarity to transcription factor Pip2p, biological_process unknown, transcriptional activator activity, plasma membrane
515. YPL002C 18 -2.5 involved in glucose derepression, SNF8, protein-vacuolar targeting, molecular_function unknown, ESCRT II complex
516. YJL103C 12 -2.5 similarity to YBR239c, biological_process unknown, molecular_function unknown, cellular_component unknown
517. YEL009C 11 -2.4 transcriptional activator of amino acid biosynthetic genes, GCN4, regulation of transcription from Pol II promoter, DNA binding, nucleus
518. YGR249W 22 -2.4 similarity to heat shock transcription factors, MGA1, filamentous growth, molecular_function unknown, cellular_component unknown
519. YOR178C 9 -2.4 ser/thr phosphoprotein phosphatase 1, regulatory chain, GAC1, meiosis, protein phosphatase type 1 activity, protein phosphatase type 1 complex
520. YMR127C 12 -2.4 involved in silencing at HMR, SAS2, chromatin silencing at telomere, H3/H4 histone acetyltransferase activity, nuclear chromatin
521. YKR034W 10 -2.4 transcriptional repressor for allantoin and GABA catabolic genes, DAL80, transcription, transcription factor activity, nucleus
522. YDL170W 8 -2.4 transcriptional activator for GABA catabolic genes, UGA3, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
523. YER051W 13 -2.4 similarity to C.elegans hypothetical protein, biological_process unknown, molecular_function unknown, cellular_component unknown
524. YJL089W 25 -2.3 interacts with SNF1 protein kinase, SIP4, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
525. YBR182C 9 -2.3 MADS-box transcription factor, SMP1, positive regulation of transcription from Pol II promoter, transcription factor activity, cytoplasm
526. YOL028C 5 -2.3 involved in transcription activation, YAP7, positive regulation of transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
527. YHR157W 3 -2.2 meiosis-specific protein, REC104, meiotic recombination, molecular_function unknown, nucleus
528. YDR223W 1 -2.2 similarity to Ifh1p, CRF1, biological_process unknown, molecular_function unknown, cellular_component unknown
529. YPR009W 25 -2.2 similarity to sterol uptake protein Sut1p, SUT2, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
530. YBR033W 14 -2.2 weak similarity to transcription factors, EDS1, biological_process unknown, molecular_function unknown, cellular_component unknown
531. YMR270C 4 -2.2 RNA polymerase I specific transcription initiation factor, RRN9, transcription from Pol I promoter, RNA polymerase I transcription factor activity, RNA polymerase I upstream activating factor complex
532. YCR106W 11 -2.1 similarity to transcription factor, RDS1, response to xenobiotic stimulus, transcription factor activity, cellular_component unknown
533. YOR172W 6 -2.1 Zn2-Cys6 zinc-finger transcription facto, YRM1, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, cytoplasm
534. YMR168C 12 -2.1 kinetochore protein complex CBF3, 71 KD subunit, CEP3, mitotic spindle checkpoint, DNA bending activity, condensed nuclear chromosome kinetochore
535. YBL005W 8 -2 pleiotropic drug resistance regulatory protein, PDR3, regulation of transcription from Pol II promoter, DNA binding, cytoplasm
536. YGL096W 4 -2 similarity to copper homeostasis protein Cup9p, TOS8, biological_process unknown, transcription factor activity, cellular_component unknown
537. YPL021W 3 -1.9 similarity to Srd1p, ECM23, pseudohyphal growth, molecular_function unknown, cellular_component unknown
538. YGL071W 4 -1.9 iron-regulated transcriptional repressor, RCS1, positive regulation of transcription from Pol II promoter, transcription factor activity, cytoplasm
539. YOR047C 7 -1.8 dosage-dependent modulator of glucose repression, STD1, regulation of transcription from Pol II promoter, protein kinase activator activity, nucleus
540. YBL021C 6 -1.8 CCAAT-binding factor subunit, HAP3, transcription, transcriptional activator activity, CCAAT-binding factor complex
541. YOR179C 1 -1.7 similarity to BRR5 protein, SYC1, transcription termination from Pol II promoter, poly(A)-independent, molecular_function unknown, nucleus
542. YDR259C 2 -1.7 transcription factor, of a fungal-specific family of bzip proteins, YAP6, positive regulation of transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
543. YBR050C 6 -1.6 regulatory subunit of type I protein phosphatase, REG2, negative regulation of transcription from Pol II promoter, protein phosphatase type 1 activity, protein phosphatase type 1 complex
544. YLR296W 2 -1.6
545. YNL025C 6 -1.5 DNA-directed RNA polymerase II holoenzyme and Kornberg^s mediator (SRB) subcomplex subunit, cyclin C homolog, SSN8, meiosis, general RNA polymerase II transcription factor activity, transcription factor complex
546. YMR164C 4 -1.5 activator of STA1, STA2, and STA3, MSS11, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
547. YLR141W 7 -1.5 RNA polymerase I specific transcription initiation factor, RRN5, transcription from Pol I promoter, RNA polymerase I transcription factor activity, RNA polymerase I upstream activating factor complex
548. YLR266C 5 -1.5 weak similarity to transcription factors, PDR8, response to stress, DNA binding, nucleus
549. YNR063W 6 -1.5 weak similarity to CYC1/CYP3 transcription activator, biological_process unknown, molecular_function unknown, cellular_component unknown
550. YPR199C 2 -1.5 involved in resistance to arsenic compounds, ARR1, positive regulation of transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
551. YMR030W 3 -1.5 respiration factor 1, RSF1, aerobic respiration, molecular_function unknown, nucleus
552. YJL105W 4 -1.4 similarity to hypothetical protein YKR029c, SET4, biological_process unknown, molecular_function unknown, cellular_component unknown
553. YIR017C 4 -1.4 transcriptional activator of sulfur amino acid metabolism, MET28, regulation of transcription from Pol II promoter, DNA binding, nucleus
554. YKL109W 4 -1.4 CCAAT-binding factor subunit, HAP4, transcription, transcriptional activator activity, CCAAT-binding factor complex
555. YBR066C 3 -1.4 weak similarity to A.niger carbon catabolite repressor protein, NRG2, invasive growth (sensu Saccharomyces), transcriptional repressor activity, nucleus
556. YOL116W 2 -1.3 transcriptional activator, MSN1, invasive growth (sensu Saccharomyces), transcriptional activator activity, nucleus
557. YBL025W 2 -1.3 RNA polymerase I-specific transcription initiation factor, RRN10, transcription from Pol I promoter, RNA polymerase I transcription factor activity, RNA polymerase I upstream activating factor complex
558. YML027W 7 -1.3 homoeodomain protein, YOX1, negative regulation of transcription from Pol II promoter, mitotic, DNA binding, nucleus
559. YLR013W 1 -1.2 weak similarity to nitrogen regulatory proteins, GAT3, transcription, transcription factor activity, nucleus
560. YIR018W 4 -1.2 involved in transcription activation, YAP5, positive regulation of transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
561. YCR018C 4 -1.1 nucleolar protein, SRD1, rRNA processing, molecular_function unknown, cytoplasm
562. YDR451C 4 -1.1 strong similarity to Yox1p, YHP1, negative regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nuclear chromosome
563. YOL108C 4 -1.1 basic helix-loop-helix transcription factor, INO4, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
564. YCR097W 1 -0.3 mating type regulatory protein, silenced copy at HMR locus, HMRA1, regulation of transcription, mating-type specific, transcription corepressor activity, nucleus
565. YGL254W 1 -0.3 sulfite resistance protein, FZF1, positive regulation of transcription from Pol II promoter, transcription factor activity, nucleus
566. YBR240C 1 0 regulator of the thiamine biosynthetic genes, THI2, positive regulation of transcription from Pol II promoter, transcriptional activator activity, nucleus
567. YCL066W 2 0 mating type regulatory protein, silenced copy at HML, HMLALPHA1, regulation of transcription from Pol II promoter, transcription coactivator activity, nucleus
568. YMR182C 1 0 transcriptional repressor protein, RGM1, negative regulation of transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
569. YKL043W 4 0 transcription factor, PHD1, pseudohyphal growth, specific RNA polymerase II transcription factor activity, nucleus
570. YCR040W 2 0 mating type regulatory protein, expressed copy at MAT locus, MATALPHA1, regulation of transcription from Pol II promoter, transcription coactivator activity, nucleus
571. YJR094C 1 0 transcription factor required for sporulation, IME1, meiosis, transcription regulator activity, nucleus
out of 575
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