Ontology Collection, GO:0003677y DNA binding  excel   txt 
 
# accession total log(e) description
1. YNL088W 233 -686.5 DNA topoisomerase II (ATP-hydrolysing), TOP2, meiotic recombination, DNA topoisomerase (ATP-hydrolyzing) activity, nucleus
2. YLR259C 1668 -498.3 heat shock protein - chaperone, mitochondrial, HSP60, protein folding, single-stranded DNA binding, mitochondrion
3. YLR304C 1296 -441.9 aconitate hydratase, ACO1, tricarboxylic acid cycle, aconitate hydratase activity, cytosol
4. YNL250W 75 -420.8 DNA repair protein, RAD50, double-strand break repair via nonhomologous end-joining, protein binding, nucleus
5. YPR104C 64 -387.7 transcriptional activator of the forkhead/hnf3 family, FHL1, rRNA processing, transcription factor activity, nucleus
6. YLR150W 1125 -381.4 specific affinity for guanine-rich quadruplex nucleic acids, STM1, telomere maintenance, telomeric DNA binding, cytoplasm
7. YLR442C 64 -361.5 silencing regulatory and DNA-repair protein, SIR3, chromatin silencing, histone binding, nucleolus
8. YNL139C 145 -346.9 regulatory protein, RLR1, mRNA-nucleus export, nucleic acid binding, THO complex
9. YPL022W 77 -303.3 component of the nucleotide excision repairosome, RAD1, removal of nonhomologous ends, single-stranded DNA specific endodeoxyribonuclease activity, nucleotide excision repair factor 1 complex
10. YER171W 47 -302.3 DNA helicase/ATPase, RAD3, transcription initiation from Pol II promoter, general RNA polymerase II transcription factor activity, transcription factor TFIIH complex
11. YER177W 1431 -298.1 14-3-3 protein involved in rapamycin-sensitive signalling, BMH1, sporulation (sensu Fungi), protein binding, nucleus
12. YDL132W 237 -281.3 controls G1/S transition, CDC53, ubiquitin-dependent protein catabolism, structural molecule activity, nuclear ubiquitin ligase complex
13. YPL153C 39 -280.7 ser/thr/tyr protein kinase, RAD53, DNA repair, protein threonine/tyrosine kinase activity, nucleus
14. YDR099W 1359 -272.5 suppressor of clathrin deficiency, BMH2, sporulation (sensu Fungi), protein binding, nucleus
15. YBR009C 758 -251.4 histone H4, HHF1, chromatin assembly or disassembly, DNA binding, nuclear nucleosome
16. YNL030W 758 -251.4 histone H4, HHF2, chromatin assembly or disassembly, DNA binding, nuclear nucleosome
17. YOL145C 272 -236.7 required for G1 cyclin expression, CTR9, transcription from Pol II promoter, Pol II transcription elongation factor activity, nucleus
18. YMR106C 73 -186.8 component of DNA end-joining repair pathway, YKU80, chromatin assembly or disassembly, RNA binding, nuclear chromatin
19. YOR229W 62 -186.6 transcriptional modulator, WTM2, regulation of meiosis, transcription corepressor activity, nucleus
20. YGR159C 764 -181.3 nuclear localization sequence binding protein, NSR1, rRNA processing, RNA binding, nucleus
21. YMR241W 435 -181.2 Mitochondrial tricarboxylate carrier - member of the mitochondrial carrier (MCF) family, YHM2, tricarboxylic acid transport, tricarboxylate carrier activity, mitochondrial inner membrane
22. YDR224C 967 -176.5 histone H2B, HTB1, chromatin assembly or disassembly, DNA binding, nuclear nucleosome
23. YBL002W 966 -173.7 histone H2B.2, HTB2, chromatin assembly or disassembly, DNA binding, nuclear nucleosome
24. YOL006C 165 -168.1 DNA topoisomerase I, TOP1, regulation of transcription from Pol II promoter, DNA topoisomerase type I activity, nucleus
25. YPL049C 190 -161.8 MAP kinase-associated protein, down-regulator of invasive growth and mating, DIG1, invasive growth (sensu Saccharomyces), transcription factor binding, nucleus
26. YNL290W 204 -157.6 DNA replication factor C, 40 kDa subunit, RFC3, mismatch repair, ATPase activity, nucleus
27. YPR135W 121 -145.1 DNA-directed DNA polymerase alpha-binding protein, CTF4, DNA repair, DNA binding, nucleus
28. YDL059C 6 -144.3 recombination and DNA repair protein, RAD59, telomerase-independent telomere maintenance, protein binding, nucleus
29. YDR328C 247 -141.3 kinetochore protein complex CBF3, subunit D, SKP1, ubiquitin-dependent protein catabolism, protein binding, cytoplasm
30. YDR097C 154 -140 DNA mismatch repair protein, MSH6, mismatch repair, DNA binding, nucleus
31. YDR369C 30 -139 DNA repair protein, XRS2, double-strand break repair via nonhomologous end-joining, protein binding, nucleus
32. YHR084W 90 -137.9 transcriptional activator, STE12, pseudohyphal growth, transcription factor activity, nucleus
33. YMR072W 280 -137.8 high mobility group protein, ABF2, mitochondrial genome maintenance, DNA binding, mitochondrial chromosome
34. YMR201C 11 -136.5 nucleotide excision repair protein, RAD14, nucleotide-excision repair, DNA damage recognition, damaged DNA binding, nucleotide excision repair factor 1 complex
35. YNL220W 579 -131.6 adenylosuccinate synthetase, ADE12, purine nucleotide biosynthesis, adenylosuccinate synthase activity, cytoplasm
36. YOR080W 27 -131.3 weak similarity to TRCDSEMBL:RNRNAHOP_1 Rattus norvegicus mRNA for Hsp70/Hsp90 organizing protein, DIA2, invasive growth (sensu Saccharomyces), molecular_function unknown, cellular_component unknown
37. YFL008W 120 -125.6 chromosome segregation protein, SMC1, mitotic sister chromatid segregation, ATPase activity, nuclear cohesin complex
38. YML032C 35 -125 recombination and DNA repair protein, RAD52, telomerase-independent telomere maintenance, DNA strand annealing activity, nucleus
39. YJR068W 141 -124.6 DNA replication factor C, 41 KD subunit, RFC2, mismatch repair, DNA clamp loader activity, DNA replication factor C complex
40. YDR216W 72 -122.2 zinc-finger transcription factor, ADR1, transcription, transcription factor activity, nucleus
41. YCR028C-A 400 -118.5 ssDNA-binding protein, mitochondrial, RIM1, mitochondrial genome maintenance, single-stranded DNA binding, mitochondrion
42. YDR225W 635 -116.8 histone H2A, HTA1, chromatin assembly or disassembly, DNA binding, nuclear nucleosome
43. YBL003C 635 -116.8 histone H2A.2, HTA2, chromatin assembly or disassembly, DNA binding, nuclear nucleosome
44. YLR233C 24 -115.7 telomere elongation protein, EST1, telomerase-dependent telomere maintenance, RNA binding, nucleus
45. YEL037C 448 -113.1 nucleotide excision repair protein (ubiquitin-like protein), RAD23, nucleotide-excision repair, DNA damage recognition, damaged DNA binding, repairosome
46. YER179W 21 -109.8 meiosis-specific protein, DMC1, meiosis, single-stranded DNA binding, nucleus
47. YHR146W 532 -109.8 similarity to pheromone-response G-protein Mdg1p, CRP1, biological_process unknown, DNA binding, nucleus
48. YNL031C 350 -96.4 histone H3, HHT2, chromatin assembly or disassembly, DNA binding, nuclear nucleosome
49. YBR010W 350 -96.4 histone H3, HHT1, chromatin assembly or disassembly, DNA binding, nucleus
50. YML065W 41 -95.8 origin recognition complex, 104 KD subunit, ORC1, DNA replication initiation, ATPase activity, nuclear origin of replication recognition complex
51. YOL094C 110 -93.7 DNA replication factor C, 37 kDa subunit, RFC4, mismatch repair, DNA clamp loader activity, DNA replication factor C complex
52. YDR499W 77 -90.2 cell cycle checkpoint protein, LCD1, telomerase-dependent telomere maintenance, protein binding, nuclear chromosome
53. YNL312W 126 -89.7 DNA replication factor A, 36 kDa subunit, RFA2, DNA recombination, DNA binding, chromosome, telomeric region
54. YAR007C 408 -88.7 DNA replication factor A, 69 KD subunit, RFA1, DNA recombination, damaged DNA binding, chromosome, telomeric region
55. YJR144W 260 -86.6 mitochondrial genome maintenance protein, MGM101, DNA repair, DNA binding, mitochondrial chromosome
56. YLR288C 17 -80.6 G2-specific checkpoint protein, MEC3, chromatin silencing at telomere, DNA binding, nucleus
57. YDR174W 484 -79.7 Non-histone protein, HMO1, plasmid maintenance, RNA polymerase I transcription factor activity, cytoplasm
58. YJL076W 328 -78.8 required for rDNA silencing and nucleolar integrity, NET1, chromatin silencing at ribosomal DNA, ribosomal DNA (rDNA) binding, nucleolus
59. YJR060W 222 -75.6 centromere binding factor 1, CBF1, methionine biosynthesis, DNA binding, nucleus
60. YCL011C 251 -70.4 potential telomere-associated protein, GBP2, telomere maintenance, RNA binding, nucleus
61. YNL216W 251 -69.2 DNA-binding protein with repressor and activator activity, RAP1, chromatin silencing at telomere, DNA binding, nucleus
62. YML095C 25 -68 DNA repair protein, RAD10, removal of nonhomologous ends, single-stranded DNA specific endodeoxyribonuclease activity, nucleotide excision repair factor 1 complex
63. YDR303C 141 -66 similarity to transcriptional regulator proteins, RSC3, regulation of transcription, DNA-dependent, DNA binding, nucleus
64. YDR227W 67 -64.9 silencing regulatory and DNA-repair protein, SIR4, chromatin silencing, histone binding, nuclear telomere cap complex
65. YGL201C 128 -63.8 involved in replication, MCM6, DNA replication initiation, chromatin binding, cytoplasm
66. YOR304W 109 -62.5 strong similarity to Drosophila ISW1 and human Snf2p homolog, ISW2, chromatin remodeling, ATPase activity, nucleus
67. YMR284W 20 -60.1 high-affinity DNA-binding protein, YKU70, chromatin assembly or disassembly, RNA binding, nuclear membrane
68. YOR217W 124 -56.7 DNA replication factor C, 95 KD subunit, RFC1, DNA repair, purine nucleotide binding, DNA replication factor C complex
69. YLR274W 123 -54.6 cell division control protein, CDC46, DNA replication initiation, chromatin binding, cytoplasm
70. YER063W 286 -54 weak similarity to human heterogeneous ribonuclear particle protein U, THO1, transcription, DNA-dependent, molecular_function unknown, nucleus
71. YML076C 41 -53.4 weak similarity to transcription factor, WAR1, response to acid, transcription factor activity, nucleus
72. YER111C 55 -52.5 transcription factor, SWI4, G1/S transition of mitotic cell cycle, transcription factor activity, nucleus
73. YJL173C 290 -51.9 DNA replication factor A, 13 KD subunit, RFA3, DNA recombination, DNA binding, chromosome, telomeric region
74. YKL112W 84 -51 ARS-binding factor, ABF1, DNA replication, DNA binding, nuclear chromatin
75. YDR310C 112 -50.2 suppressor of SIR mutations, SUM1, chromatin silencing at telomere, transcriptional repressor activity, nucleus
76. YPL127C 279 -48.5 histone H1 protein, HHO1, regulation of transcription, DNA-dependent, DNA binding, nucleus
77. YBR060C 48 -47.8 origin recognition complex, 72 kDa subunit, ORC2, DNA replication initiation, DNA replication origin binding, nuclear origin of replication recognition complex
78. YPR019W 94 -46.9 member of the Cdc46p/Mcm2p/Mcm3p family, CDC54, DNA replication initiation, chromatin binding, cytoplasm
79. YLR403W 32 -46.1 zinc finger protein, SFP1, regulation of cell size, transcription factor activity, nucleus
80. YBR049C 131 -46.1 transcription factor, REB1, regulation of transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
81. YPR052C 199 -45.4 nonhistone chromosomal protein related to mammalian HMG1, NHP6A, regulation of transcription from Pol II promoter, chromatin binding, nuclear chromatin
82. YMR070W 21 -45.1 high-copy suppressor of MOT1-SPT3 synthetic lethality, MOT3, transcription, DNA binding, nucleus
83. YIL130W 67 -44.6 similarity to Put3p and to hypothetical protein YJL206c, biological_process unknown, molecular_function unknown, nucleus
84. YBR089C-A 127 -43.5 nonhistone chromosomal protein, NHP6B, regulation of transcription from Pol II promoter, chromatin binding, nuclear chromatin
85. YER088C 101 -42.6 involved in derepression of telomeric silencing, DOT6, regulation of transcription from Pol II promoter, molecular_function unknown, cytoplasm
86. YER161C 35 -42.3 multifunctional HMG-like chromatin protein, SPT2, negative regulation of transcription from Pol II promoter, DNA binding, nucleus
87. YOL090W 96 -39.7 DNA mismatch repair protein, MSH2, DNA recombination, ATPase activity, nuclear chromosome
88. YBR202W 82 -39.2 cell division control protein, CDC47, DNA replication initiation, chromatin binding, cytoplasm
89. YBL023C 92 -39.2 member of the Mcm2p, Mcm3p, Cdc46p family, MCM2, DNA replication initiation, chromatin binding, cytoplasm
90. YPL082C 151 -38.5 transcriptional accessory protein, MOT1, regulation of transcription from Pol II promoter, ATPase activity, nuclear chromosome
91. YMR094W 14 -38.1 kinetochore protein complex, CBF3, 58 KD subunit, CTF13, centromere and kinetochore complex maturation, DNA bending activity, condensed nuclear chromosome kinetochore
92. YNL262W 150 -37.4 DNA-directed DNA polymerase epsilon, catalytic subunit A, POL2, chromatin silencing at telomere, epsilon DNA polymerase activity, replication fork
93. YML007W 105 -37.3 transcriptional activator involved in oxidative stress response, YAP1, response to oxidative stress, transcription factor activity, cytoplasm
94. YEL032W 169 -35.9 replication initiation protein, MCM3, DNA replication initiation, chromatin binding, cytoplasm
95. YNL075W 107 -35.5 component of the U3 small nucleolar ribonucleoprotein, IMP4, rRNA modification, rRNA primary transcript binding, small nucleolar ribonucleoprotein complex
96. YDR121W 84 -35.1 DNA polymerase II (epsilon) 4th subunit, DPB4, chromatin silencing at telomere, epsilon DNA polymerase activity, chromatin accessibility complex
97. YML081W 38 -34.8 strong similarity to ZMS1 protein, biological_process unknown, molecular_function unknown, nucleus
98. YBR215W 76 -34.2 cell cycle regulatory protein, HPC2, G1/S-specific transcription in mitotic cell cycle, transcription regulator activity, nucleus
99. YLR131C 29 -33.8 metallothionein expression activator, ACE2, G1-specific transcription in mitotic cell cycle, transcriptional activator activity, nucleus
100. YKR095W-A 79 -32.4 conserved hypothetical protein, PCC1, biological_process unknown, molecular_function unknown, cellular_component unknown
101. YIL131C 13 -32 forkhead protein, involved in transcriptional silencing, cell morphology and cell cycle, FKH1, pseudohyphal growth, transcription factor activity, nucleus
102. YLR263W 16 -31.8 meiosis-specific protein, synaptonemal protein, RED1, synaptonemal complex formation, molecular_function unknown, synaptonemal complex
103. YLL004W 28 -31.6 origin recognition complex, 62 kDa subunit, ORC3, DNA replication initiation, DNA replication origin binding, nuclear origin of replication recognition complex
104. YJR127C 40 -31.2 transcription factor with similarity to regulatory protein Ard1p, ZMS1, biological_process unknown, transcription factor activity, nucleus
105. YJL184W 84 -31 hypothetical protein, GON7, response to dessication, molecular_function unknown, cellular_component unknown
106. YBR073W 75 -29.9 required for mitotic diploid-specific recombination and repair and meiosis, RDH54, meiotic recombination, DNA-dependent ATPase activity, nucleus
107. YIR002C 18 -29.6 protection of the genome from spontaneous and chemically induced damage, MPH1, DNA repair, RNA helicase activity, nucleus
108. YPR175W 49 -29.5 DNA-directed DNA polymerase epsilon, subunit B, DPB2, lagging strand elongation, epsilon DNA polymerase activity, replication fork
109. YGL013C 59 -29.4 transcription factor, PDR1, regulation of transcription from Pol II promoter, DNA binding, nucleus
110. YPL128C 53 -28 telomere TTAGGG repeat-binding factor 1, TBF1, loss of chromatin silencing, DNA binding, nucleus
111. YKR099W 37 -27.4 transcription factor, BAS1, transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
112. YMR016C 48 -26.8 regulatory protein in the PKA signal transduction pathway, SOK2, pseudohyphal growth, transcription factor activity, nucleus
113. YHR056C 43 -26.7 strong similarity to YHR054c, RSC30, regulation of transcription, DNA-dependent, DNA binding, RSC complex
114. YNL068C 58 -26.3 homology to D.melanogaster forkhead protein, FKH2, pseudohyphal growth, transcription factor activity, nucleus
115. YOR140W 30 -26.1 transcription factor, SFL1, negative regulation of transcription from Pol II promoter, specific transcriptional repressor activity, nuclear chromosome
116. YJR140C 39 -25.9 involved in cell cycle regulation of histone transcription, HIR3, G1/S-specific transcription in mitotic cell cycle, transcription corepressor activity, nucleus
117. YDR169C 82 -25.7 SIN3 protein-binding protein, STB3, biological_process unknown, molecular_function unknown, cytoplasm
118. YLR103C 19 -25.6 required for minichromosome maintenance and initiation of chromosomal DNA replication, CDC45, DNA replication initiation, DNA binding, replication fork
119. YKL032C 39 -25.6 intrastrand crosslink recognition protein and transcription factor, IXR1, DNA repair, DNA binding, nuclear chromosome
120. YGR099W 18 -24.6 involved in controlling telomere length and position effect, TEL2, telomerase-dependent telomere maintenance, telomeric DNA binding, nuclear telomere cap complex
121. YOR113W 41 -24 asparagine-rich zinc finger protein, AZF1, regulation of transcription, DNA-dependent, DNA binding, nucleus
122. YGL162W 6 -23.9 hypoxic protein involved in sterol uptake, SUT1, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
123. YLR256W 51 -23.7 transcription factor, HAP1, aerobic respiration, specific RNA polymerase II transcription factor activity, nucleus
124. YER068W 94 -23.7 transcriptional repressor, MOT2, regulation of transcription from Pol II promoter, 3'-5'-exoribonuclease activity, cytoplasm
125. YKR038C 44 -23.5 Putative O-sialo-glycoprotein-endopeptidase A1, KAE1, biological_process unknown, O-sialoglycoprotein endopeptidase activity, cytoplasm
126. YDR195W 60 -23.3 RNA 3^-end formation protein, REF2, mRNA processing, cleavage and polyadenylylation specificity factor activity, nucleus
127. YBR267W 62 -22.5 REquired for Isotropic bud growth, REI1, bud growth, molecular_function unknown, cytoplasm
128. YGL073W 54 -22.1 heat shock transcription factor, HSF1, regulation of transcription from Pol II promoter, transcription factor activity, nucleus
129. YBR087W 75 -21.9 DNA replication factor C, 40 KD subunit, RFC5, mismatch repair, DNA clamp loader activity, DNA replication factor C complex
130. YBR212W 75 -21.9 glucose-repressible RNA-binding protein, NGR1, regulation of growth, RNA binding, cytoplasm
131. YDR217C 46 -21.5 DNA repair checkpoint protein, RAD9, DNA repair, protein binding, nucleus
132. YMR043W 43 -21.4 transcription factor of the MADS box family, MCM1, regulation of transcription from Pol II promoter, DNA binding, nucleus
133. YIL036W 77 -21.3 ATF/CREB activator, CST6, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
134. YBL103C 34 -21.2 bHLH/zip transcription factor that regulates CIT2 gene expression, RTG3, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, cytoplasm
135. YER148W 47 -20.9 the TATA-binding protein TBP, SPT15, transcription initiation from Pol II promoter, DNA binding, nucleus
136. YPL038W 17 -20.7 transcriptional regulator of sulfur amino acid metabolism, MET31, regulation of transcription, DNA binding, cytoplasm
137. YDL056W 49 -20.4 transcription factor, subunit of the MBF factor, MBP1, regulation of cell cycle, DNA binding, nucleus
138. YDR207C 48 -20.3 negative transcriptional regulator, UME6, negative regulation of transcription, mitotic, DNA binding, nucleus
139. YFR031C 48 -20.1 chromosome segregation protein, SMC2, mitotic sister chromatid segregation, ATPase activity, nuclear condensin complex
140. YKL062W 36 -19.9 transcriptional activator, MSN4, response to stress, DNA binding, cytoplasm
141. YML113W 7 -19.8 datin, oligo(dA)/oligo(dT)-binding protein, DAT1, negative regulation of transcription from Pol II promoter, AT DNA binding, nucleus
142. YLR176C 17 -19.7 repressor of DNA damage-inducible genes, RFX1, negative regulation of transcription from Pol II promoter, specific transcriptional repressor activity, cytoplasm
143. YKL020C 43 -19 dosage-dependent suppressor of Ty-induced promotor mutations, SPT23, positive regulation of transcription from Pol II promoter, transcriptional activator activity, endoplasmic reticulum membrane
144. YMR167W 26 -18.9 DNA mismatch repair protein, MLH1, meiotic recombination, DNA binding, nucleus
145. YBR083W 10 -18.8 Ty transcription activator, TEC1, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
146. YGR140W 22 -18.7 kinetochore protein complex CBF3, 110 KD subunit, CBF2, chromosome segregation, DNA bending activity, condensed nuclear chromosome kinetochore
147. YHR081W 54 -18.7 like rRNA Processing protein involved in regulation of DNA repair and recombination, LRP1, double-strand break repair via nonhomologous end-joining, molecular_function unknown, nuclear exosome (RNase complex)
148. YFL031W 2 -18.7 transcription factor, HAC1, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
149. YHR206W 47 -18.6 transcription factor with similarity to Hsf1p, SKN7, response to osmotic stress, transcription factor activity, nucleus
150. YNL023C 52 -18.4 similarity to D.melanogaster shuttle craft protein, FAP1, biological_process unknown, transcription factor activity, cellular_component unknown
151. YGL131C 22 -18.2 weak similarity to S.pombe hypothetical protein C3H1.12C, SNT2, biological_process unknown, molecular_function unknown, cytoplasm
152. YER040W 27 -18.1 transcription factor for positive nitrogen regulation, GLN3, positive regulation of transcription from Pol II promoter, transcription factor activity, nucleus
153. YKL038W 23 -18 regulator of glucose-induced genes, RGT1, glucose metabolism, DNA binding, nucleus
154. YJL056C 23 -18 metalloregulatory protein involved in zinc-responsive transcriptional regulation, ZAP1, regulation of transcription from Pol II promoter, DNA binding, nucleus
155. YJL127C 9 -18 transcription regulatory protein, SPT10, chromatin remodeling, histone acetyltransferase activity, nucleus
156. YDR096W 53 -17.9 DNA damage-responsive repressor of PHR1, GIS1, phospholipid metabolism, transcription factor activity, nucleus
157. YDL106C 23 -17.9 homeodomain protein, PHO2, transcription, transcription factor activity, nucleus
158. YNL261W 10 -17.5 origin recognition complex, 50 kDa subunit, ORC5, DNA replication initiation, ATPase activity, nuclear origin of replication recognition complex
159. YHR006W 12 -17.4 involved in pre-tRNA splicing, STP2, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
160. YGR002C 22 -17.3 SWr Complex member, SWC4, chromatin remodeling, DNA binding, nucleus
161. YHL027W 13 -17.3 meiotic regulatory protein, RIM101, meiosis, specific transcriptional repressor activity, nucleus
162. YFL003C 10 -17.2 meiosis-specific protein, MSH4, meiotic recombination, DNA binding, nuclear chromosome
163. YLR032W 56 -17.1 DNA helicase, RAD5, DNA repair, ATPase activity, nuclear chromatin
164. YAL051W 28 -16.6 peroxisome proliferating transcription factor, OAF1, peroxisome organization and biogenesis, DNA binding, nucleus
165. YDR110W 21 -16.5 DNA replication fork blocking protein, FOB1, DNA recombination, ribosomal DNA (rDNA) binding, nucleolus
166. YBR278W 27 -16.2 DNA-directed DNA polymerase epsilon, subunit C, DPB3, chromatin silencing at telomere, epsilon DNA polymerase activity, replication fork
167. YBR275C 50 -16.1 RAP1-interacting factor 1, RIF1, chromatin silencing at telomere, molecular_function unknown, nuclear telomere cap complex
168. YER169W 23 -15.9 similarity to human retinoblastoma binding protein 2, RPH1, DNA repair, specific transcriptional repressor activity, nucleus
169. YBL088C 30 -15.4 telomere length control protein, TEL1, telomerase-dependent telomere maintenance, protein kinase activity, nucleus
170. YPL089C 23 -15.4 transcription factor of the MADS box family, RLM1, cell wall organization and biogenesis, DNA binding, nucleus
171. YCR065W 14 -14.9 transcription factor, HCM1, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
172. YGL035C 36 -14.1 transcriptional repressor, MIG1, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, cytoplasm
173. YER028C 12 -13.9 similarity to Mig1p, MIG3, negative regulation of transcription from Pol II promoter, DNA binding, nucleus
174. YHR120W 15 -13.1 DNA mismatch repair protein, mitochondrial, MSH1, DNA repair, ATP binding, mitochondrion
175. YCR092C 16 -13 DNA mismatch repair protein, MSH3, DNA recombination, damaged DNA binding, nuclear chromosome
176. YHR164C 35 -13 DNA helicase, DNA2, DNA repair, ATP-dependent DNA helicase activity, nucleus
177. YBR114W 21 -13 nucleotide excision repair protein, RAD16, nucleotide-excision repair, DNA damage recognition, DNA-dependent ATPase activity, repairosome
178. YIL101C 13 -12.8 stress-induced transcriptional repressor, XBP1, response to stress, transcription factor activity, nucleus
179. YMR037C 31 -12.8 stress responsive regulatory protein, MSN2, response to stress, DNA binding, nucleus
180. YPR162C 33 -12.6 origin recognition complex, 56 KD subunit, ORC4, DNA replication initiation, DNA replication origin binding, nuclear origin of replication recognition complex
181. YFR034C 15 -12.6 transcription factor, PHO4, phosphate metabolism, transcription factor activity, cytoplasm
182. YBL054W 40 -12 weak similarity to transforming protein (B-myb), biological_process unknown, molecular_function unknown, cytoplasm
183. YDR146C 15 -11.9 transcription factor, SWI5, G1-specific transcription in mitotic cell cycle, transcriptional activator activity, cytoplasm
184. YLR228C 26 -11.9 strong similarity to YDR213w, weak similarity to Lys14p, ECM22, sterol biosynthesis, RNA polymerase II transcription factor activity, nucleus
185. YNL027W 22 -11.6 calcineurin responsive zinc-finger, CRZ1, regulation of transcription, DNA-dependent, transcription factor activity, cytoplasm
186. YOL089C 15 -11.5 transcriptional activator of ENA1, HAL9, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
187. YMR224C 19 -11.2 DNA repair and meiotic recombination protein, MRE11, DNA repair, protein binding, nucleus
188. YOR337W 19 -11.1 TY1 enhancer activator, TEA1, transcription, DNA binding, nucleus
189. YFL021W 18 -11.1 transcription factor for nitrogen regulation, GAT1, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
190. YLR098C 12 -11 transcription factor, CHA4, regulation of transcription, DNA-dependent, transcription factor activity, nucleus
191. YCL055W 8 -10.9 regulatory protein required for pheromone induction of karyogamy genes, KAR4, meiosis, transcription regulator activity, nucleus
192. YJR052W 4 -10.9 nucleotide excision repair protein, RAD7, nucleotide-excision repair, DNA damage recognition, DNA binding, repairosome
193. YHR118C 10 -10.8 origin recognition complex, 50 KD subunit, ORC6, DNA replication initiation, DNA replication origin binding, nuclear origin of replication recognition complex
194. YCR066W 15 -10.6 DNA repair protein, RAD18, DNA repair, ubiquitin conjugating enzyme activity, nuclear chromatin
195. YER162C 26 -10.5 excision repair protein, RAD4, nucleotide-excision repair, DNA damage recognition, damaged DNA binding, repairosome
196. YJL194W 22 -10.5 cell division control protein, CDC6, pre-replicative complex formation and maintenance, protein binding, pre-replicative complex
197. YFL052W 9 -10.2 strong similarity to Mal63p, YPR196w and Mal13p, biological_process unknown, DNA binding, cellular_component unknown
198. YNL082W 19 -10.2 DNA mismatch repair protein, PMS1, meiosis, DNA binding, nuclear chromosome
199. YBL008W 53 -10.1 histone transcription regulator, HIR1, regulation of transcription from Pol II promoter, transcription corepressor activity, nucleus
200. YLR278C 39 -9.8 weak similarity to regulatory proteins, biological_process unknown, molecular_function unknown, nucleus
201. YPL133C 8 -9.8 weak similarity to transcription factors, RDS2, response to xenobiotic stimulus, transcription factor activity, cytoplasm
202. YKR101W 18 -9.5 silencing regulatory protein, SIR1, chromatin silencing at silent mating-type cassette (sensu Fungi), DNA binding, chromatin silencing complex
203. YHR178W 26 -9.5 transcription factor, SIN3 binding, STB5, response to xenobiotic stimulus, transcription factor activity, nucleus
204. YDL220C 16 -9.3 cell division control protein, CDC13, telomere maintenance, single-stranded DNA binding, nuclear telomere cap complex
205. YPL248C 8 -9.3 transcription factor, GAL4, regulation of transcription, DNA-dependent, transcriptional activator activity, nucleus
206. YDR254W 30 -9 outer kinetochore protein, CHL4, chromosome segregation, DNA binding, condensed nuclear chromosome kinetochore
207. YOR025W 24 -8.8 silencing protein, HST3, chromatin silencing at telomere, DNA binding, nucleus
208. YOR038C 55 -8.5 histone transcription regulator, HIR2, regulation of transcription from Pol II promoter, transcription corepressor activity, nucleus
209. YKL089W 17 -8 inner kinetochore protein, MIF2, mitotic spindle assembly (sensu Fungi), centromeric DNA binding, nucleus
210. YDR034C 19 -7.9 transcriptional activator of lysine pathway genes, LYS14, lysine biosynthesis, aminoadipic pathway, transcriptional activator activity, nucleus
211. YOR162C 33 -7.9 transcription factor, YRR1, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
212. YMR019W 209 -7.9 weak similarity to YIL130w, Put3p and other transcription factors, STB4, biological_process unknown, DNA binding, nucleus
213. YDR191W 5 -7.6 member of the Sir2p family of putative NAD-dependent histone deacetylases, HST4, chromatin silencing at telomere, DNA binding, cytoplasm
214. YKL015W 33 -7.6 positive activator of the proline utilisation pathway, PUT3, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
215. YCR039C 16 -7.6 mating type regulatory protein, expressed copy at MAT locus, MATALPHA2, regulation of transcription from Pol II promoter, transcription corepressor activity, nucleus
216. YBR150C 39 -7.6 weak similarity to transcription factors, TBS1, biological_process unknown, molecular_function unknown, cytoplasm
217. YDR253C 8 -7.5 transcriptional regulator of sulfur amino acid metabolism, MET32, sulfur amino acid metabolism, DNA binding, nucleus
218. YPL230W 9 -7.4 similarity to Rgm1p, weak similarity to transcription factors, biological_process unknown, molecular_function unknown, cellular_component unknown
219. YGR067C 12 -7.4 weak similarity to transcription factors, biological_process unknown, molecular_function unknown, cellular_component unknown
220. YHR124W 13 -7.2 meiosis-specific protein, NDT80, meiosis, transcription factor activity, nuclear chromosome
221. YDR463W 7 -7 pre-tRNA splicing protein, transcription factor, STP1, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
222. YBR297W 6 -7 maltose fermentation regulatory protein, MAL33, regulation of transcription, DNA-dependent, transcription factor activity, nucleus
223. YPL075W 24 -6.9 transcriptional activator, GCR1, positive regulation of transcription from Pol II promoter, DNA binding, nucleus
224. YLR451W 10 -6.8 transcription factor, LEU3, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
225. YPL202C 5 -6.3 similarity to cell size regulation protein Rcs1p, AFT2, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
226. YPL177C 1 -6.2 involved in copper homeostasis repression of protein import, CUP9, transcription initiation from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
227. YLR375W 24 -6.1 involved in pre-tRNA splicing and in uptake of branched-chain amino acids, STP3, biological_process unknown, molecular_function unknown, nucleus
228. YOR368W 4 -6.1 DNA damage checkpoint control protein, RAD17, meiotic recombination, exonuclease activity, nucleus
229. YPR065W 7 -6 heme-dependent transcriptional repressor of hypoxic genes, ROX1, negative regulation of transcription from Pol II promoter, specific transcriptional repressor activity, nuclear chromosome
230. YGL209W 4 -6 C2H2 zinc-finger protein, MIG2, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
231. YDR052C 8 -5.9 regulatory subunit for Cdc7p protein kinase, DBF4, protein amino acid phosphorylation, protein serine/threonine kinase activity, nucleoplasm
232. YPR022C 24 -5.9 weak similarity to fruit fly dorsal protein and Snf5p, biological_process unknown, molecular_function unknown, cytoplasm
233. YMR280C 22 -5.8 transcription factor involved in gluconeogenesis, CAT8, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
234. YLR223C 18 -5.8 pre-rRNA processing machinery control protein, IFH1, rRNA processing, molecular_function unknown, nucleus
235. YDR520C 25 -5.7 weak similarity to transcription factors of the zinc finger class, biological_process unknown, molecular_function unknown, cytoplasm
236. YOR344C 3 -5.7 basic helix-loop-helix transcription factor, TYE7, transcription, transcription factor activity, nucleus
237. YPR196W 5 -5.4 strong similarity to regulatory protein Mal63p, biological_process unknown, molecular_function unknown, cellular_component unknown
238. YDR043C 8 -5.2 transcriptional repressor for glucose repression of STA1 gene expression, NRG1, regulation of transcription from Pol II promoter, DNA binding, nucleus
239. YHL009C 8 -5 transcription factor, of a fungal-specific family of bzip proteins, YAP3, regulation of transcription from Pol II promoter, transcription factor activity, nucleus
240. YJL110C 5 -4.7 transcriptional repressor, GZF3, negative regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
241. YPL024W 3 -4.6 negative regulator of CTS1 expression, NCE4, biological_process unknown, molecular_function unknown, cytoplasm
242. YGL163C 14 -4.5 DNA-dependent ATPase of the Snf2p family, RAD54, chromatin remodeling, DNA-dependent ATPase activity, nucleus
243. YOR358W 2 -4.2 CCAAT-binding factor subunit, HAP5, transcription, transcriptional activator activity, CCAAT-binding factor complex
244. YBR239C 17 -4.1 weak similarity to transcription factor Put3p, biological_process unknown, molecular_function unknown, cytoplasm
245. YDR288W 11 -4.1 hypothetical protein, NSE3, DNA repair, DNA binding, cytoplasm
246. YKL222C 15 -4 weak similarity to transcription factors, similarity to finger proteins YOR162c, YOR172w and YLR266c, biological_process unknown, molecular_function unknown, cellular_component unknown
247. YDR026C 41 -4 strong similarity to DNA-binding protein Reb1p, biological_process unknown, molecular_function unknown, nucleolus
248. YOR028C 2 -3.8 transcriptional activator, CIN5, regulation of transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
249. YLR318W 9 -3.4 catalytic subunit of the telomerase, EST2, telomerase-dependent telomere maintenance, telomeric template RNA reverse transcriptase activity, nucleus
250. YER184C 16 -3.2 similarity to multidrug resistance proteins Pdr3p and Pdr1p, biological_process unknown, molecular_function unknown, cellular_component unknown
251. YDR421W 26 -3.2 positive transcription regulator of ARO9 and ARO10, ARO80, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
252. YGR288W 10 -3.2 maltose pathway regulatory protein, MAL13, regulation of transcription, DNA-dependent, transcription factor activity, nucleus
253. YOR380W 12 -3.1 weak similarity to Pdr3p, RDR1, response to xenobiotic stimulus, transcription factor activity, nucleus
254. YLR014C 21 -2.9 transcription factor regulating pyrimidine pathway, PPR1, regulation of transcription, DNA-dependent, transcription factor activity, nucleus
255. YOR032C 5 -2.6 weak similarity to DNA-binding proteins, HMS1, pseudohyphal growth, transcription factor activity, cellular_component unknown
256. YIL072W 14 -2.6 meiosis-specific protein, synaptonemal complex, HOP1, meiosis, DNA binding, condensed nuclear chromosome
257. YDR082W 5 -2.6 involved in telomere length regulation, STN1, telomere capping, protein binding, nuclear telomere cap complex
258. YOR295W 7 -2.6 subunit of RNA polymerase I transcription factor, UAF30, transcription from Pol I promoter, RNA polymerase I transcription factor activity, RNA polymerase I upstream activating factor complex
259. YGL183C 2 -2.6 Mnd1/Hop2 complex promote meiotic chromosome pairing and DSB repair, MND1, meiotic recombination, molecular_function unknown, condensed nuclear chromosome
260. YLR453C 4 -2.5 Rap1p interacting factor 2, RIF2, telomerase-dependent telomere maintenance, telomeric DNA binding, nuclear telomere cap complex
261. YMR136W 11 -2.5 weak similarity to YIR013c and YLR013w, GAT2, transcription, transcription factor activity, nucleus
262. YLL054C 13 -2.5 similarity to transcription factor Pip2p, biological_process unknown, transcriptional activator activity, plasma membrane
263. YIL150C 23 -2.5 required for S-phase initiation or completion, MCM10, DNA replication initiation, chromatin binding, nucleus
264. YJL103C 12 -2.5 similarity to YBR239c, biological_process unknown, molecular_function unknown, cellular_component unknown
265. YEL009C 11 -2.4 transcriptional activator of amino acid biosynthetic genes, GCN4, regulation of transcription from Pol II promoter, DNA binding, nucleus
266. YER130C 2 -2.4 similarity to Msn2p and weak similarity to Msn4p, biological_process unknown, molecular_function unknown, cellular_component unknown
267. YGR249W 22 -2.4 similarity to heat shock transcription factors, MGA1, filamentous growth, molecular_function unknown, cellular_component unknown
268. YKR034W 10 -2.4 transcriptional repressor for allantoin and GABA catabolic genes, DAL80, transcription, transcription factor activity, nucleus
269. YGL175C 11 -2.4 meiotic recombination protein, SAE2, meiotic DNA double-strand break processing, molecular_function unknown, cytoplasm
270. YDL170W 8 -2.4 transcriptional activator for GABA catabolic genes, UGA3, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
271. YJL089W 25 -2.3 interacts with SNF1 protein kinase, SIP4, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
272. YBR182C 9 -2.3 MADS-box transcription factor, SMP1, positive regulation of transcription from Pol II promoter, transcription factor activity, cytoplasm
273. YPR009W 25 -2.2 similarity to sterol uptake protein Sut1p, SUT2, regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
274. YBR033W 14 -2.2 weak similarity to transcription factors, EDS1, biological_process unknown, molecular_function unknown, cellular_component unknown
275. YMR270C 4 -2.2 RNA polymerase I specific transcription initiation factor, RRN9, transcription from Pol I promoter, RNA polymerase I transcription factor activity, RNA polymerase I upstream activating factor complex
276. YCR106W 11 -2.1 similarity to transcription factor, RDS1, response to xenobiotic stimulus, transcription factor activity, cellular_component unknown
277. YOR172W 6 -2.1 Zn2-Cys6 zinc-finger transcription facto, YRM1, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, cytoplasm
278. YIL056W 10 -2.1 similarity to YER064c, biological_process unknown, molecular_function unknown, cytoplasm
279. YMR137C 5 -2.1 DNA repair protein, PSO2, DNA repair, damaged DNA binding, nucleus
280. YMR168C 12 -2.1 kinetochore protein complex CBF3, 71 KD subunit, CEP3, mitotic spindle checkpoint, DNA bending activity, condensed nuclear chromosome kinetochore
281. YOL104C 5 -2 meiotic telomere protein, NDJ1, synapsis, telomeric DNA binding, nuclear chromosome, telomeric region
282. YGL096W 4 -2 similarity to copper homeostasis protein Cup9p, TOS8, biological_process unknown, transcription factor activity, cellular_component unknown
283. YPL021W 3 -1.9 similarity to Srd1p, ECM23, pseudohyphal growth, molecular_function unknown, cellular_component unknown
284. YGL071W 4 -1.9 iron-regulated transcriptional repressor, RCS1, positive regulation of transcription from Pol II promoter, transcription factor activity, cytoplasm
285. YPR013C 2 -1.8 similarity to transcription factors, biological_process unknown, molecular_function unknown, cellular_component unknown
286. YER173W 11 -1.8 cell cycle checkpoint protein, RAD24, meiotic recombination, DNA clamp loader activity, nucleus
287. YCR096C 1 -1.8 mating type regulatory protein, silenced copy at HMR locus, HMRA2, biological_process unknown, molecular_function unknown, cellular_component unknown
288. YDR259C 2 -1.7 transcription factor, of a fungal-specific family of bzip proteins, YAP6, positive regulation of transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
289. YLR234W 9 -1.6 DNA topoisomerase III, TOP3, meiotic recombination, DNA topoisomerase type I activity, nucleus
290. YLR010C 3 -1.6 involved in telomere length regulation and telomere end protection, TEN1, telomere capping, molecular_function unknown, nuclear telomere cap complex
291. YDL020C 1 -1.5 26S proteasome subunit, RPN4, ubiquitin-dependent protein catabolism, transcriptional activator activity, proteasome regulatory particle (sensu Eukarya)
292. YDL048C 4 -1.5 involved in pre-tRNA splicing and in uptake of branched-chain amino acids, STP4, biological_process unknown, molecular_function unknown, cytoplasm
293. YLR141W 7 -1.5 RNA polymerase I specific transcription initiation factor, RRN5, transcription from Pol I promoter, RNA polymerase I transcription factor activity, RNA polymerase I upstream activating factor complex
294. YLR266C 5 -1.5 weak similarity to transcription factors, PDR8, response to stress, DNA binding, nucleus
295. YNR063W 6 -1.5 weak similarity to CYC1/CYP3 transcription activator, biological_process unknown, molecular_function unknown, cellular_component unknown
296. YPR199C 2 -1.5 involved in resistance to arsenic compounds, ARR1, positive regulation of transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
297. YIR017C 4 -1.4 transcriptional activator of sulfur amino acid metabolism, MET28, regulation of transcription from Pol II promoter, DNA binding, nucleus
298. YBL025W 2 -1.3 RNA polymerase I-specific transcription initiation factor, RRN10, transcription from Pol I promoter, RNA polymerase I transcription factor activity, RNA polymerase I upstream activating factor complex
299. YML027W 7 -1.3 homoeodomain protein, YOX1, negative regulation of transcription from Pol II promoter, mitotic, DNA binding, nucleus
300. YLR013W 1 -1.2 weak similarity to nitrogen regulatory proteins, GAT3, transcription, transcription factor activity, nucleus
301. YCR018C 4 -1.1 nucleolar protein, SRD1, rRNA processing, molecular_function unknown, cytoplasm
302. YDR451C 4 -1.1 strong similarity to Yox1p, YHP1, negative regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nuclear chromosome
303. YOL108C 4 -1.1 basic helix-loop-helix transcription factor, INO4, positive regulation of transcription from Pol II promoter, specific RNA polymerase II transcription factor activity, nucleus
304. YGL254W 1 -0.3 sulfite resistance protein, FZF1, positive regulation of transcription from Pol II promoter, transcription factor activity, nucleus
305. YMR182C 1 0 transcriptional repressor protein, RGM1, negative regulation of transcription from Pol II promoter, RNA polymerase II transcription factor activity, nucleus
306. YIL009C-A 1 0 subunit of the telomerase, EST3, telomerase-dependent telomere maintenance, telomerase activity, nucleus
307. YKL043W 4 0 transcription factor, PHD1, pseudohyphal growth, specific RNA polymerase II transcription factor activity, nucleus
out of 315
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